Evidence map›Paper›PMID 22532680›Full record

ArticleJournal of virology2012

The influenza A virus PB2, PA, NP, and M segments play a pivotal role during genome packaging.

Qinshan Gao, Yi-Ying Chou, Sultan Doğanay, Reza Vafabakhsh, Taekjip Ha, Peter Palese

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Selective Genome Packaging Mechanisms of Influenza A Viruses.Cold Spring Harbor perspectives in medicine · 2021
    Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. Frustration and fidelity in influenza genome assembly.Journal of the Royal Society, Interface · 2019
    Article
  18. Article
  19. Review
  20. Viruses · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Qinshan GaoDepartment of Microbiology, Mount Sinai School of Medicine, New York, New York, USA.
Yi-Ying Chou
Sultan Doğanay
Reza Vafabakhsh
Taekjip Ha
Peter Palese
Icahn School of Medicine at Mount Sinai · USUniversity of Illinois Urbana-Champaign · US

Funding

Viral Pathogenesis and TherapeuticsU54AI057158 · NIAID · WADSWORTH CENTER · PI LIPKIN, W. IAN · 2003 to 2014
$100.8M
TRIM mediated host antiviral responses during influenza virus infectionsU19AI083025 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 2009 to 2013
$10.0M
Single Molecule Study of Helicase MechanismsR01GM065367 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI HA, TAEKJIP · 2002 to 2014
$3.6M
Howard Hughes Medical InstituteNIAID NIH HHS HHSN266200700010CNIAID NIH HHS U19 AI083025NIAID NIH HHS U19AI083025NIAID NIH HHS U54 AI057158NIAID NIH HHS U54 AI057158-04NIGMS NIH HHS R01 GM065367PHS HHS HHSN2662000700010C
6 · The paper itself

Abstract

The genomes of influenza A viruses consist of eight negative-strand RNA segments. Recent studies suggest that influenza viruses are able to specifically package their segmented genomes into the progeny virions. Segment-specific packaging signals of influenza virus RNAs (vRNAs) are located in the 5' and 3' noncoding regions, as well as in the terminal regions, of the open reading frames. How these packaging signals function during genome packaging remains unclear. Previously, we generated a 7-segmented virus in which the hemagglutinin (HA) and neuraminidase (NA) segments of the influenza A/Puerto Rico/8/34 virus were replaced by a chimeric influenza C virus hemagglutinin/esterase/fusion (HEF) segment carrying the HA packaging sequences. The robust growth of the HEF virus suggested that the NA segment is not required for the packaging of other segments. In this study, in order to determine the roles of the other seven segments during influenza A virus genome assembly, we continued to use this HEF virus as a tool and analyzed the effects of replacing the packaging sequences of other segments with those of the NA segment. Our results showed that deleting the packaging signals of the PB1, HA, or NS segment had no effect on the growth of the HEF virus, while growth was greatly impaired when the packaging sequence of the PB2, PA, nucleoprotein (NP), or matrix (M) segment was removed. These results indicate that the PB2, PA, NP, and M segments play a more important role than the remaining four vRNAs during the genome-packaging process.

Indexed as

Virus AssemblyAnimalsCell LineChick EmbryoHumansInfluenza A Virus, H1N1 SubtypeMolecular Sequence DataNucleocapsid ProteinsRNA-Binding ProteinsRNA-Dependent RNA PolymeraseRNA, ViralSequence Analysis, DNAViral Core ProteinsViral Matrix ProteinsViral ProteinsM-protein, influenza virusNP protein, Influenza A virusNucleocapsid ProteinsPA protein, influenza virusesPB2 protein, influenza virusRNA-Binding ProteinsRNA-Dependent RNA PolymeraseRNA, ViralViral Core ProteinsViral Matrix ProteinsViral Proteins

Identifiers

PMID22532680
PMCPMC3416350
OpenAlexW2164160981

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.