Evidence map›Paper›PMID 22529953›Full record

ArticlePloS one2012

Genome-wide gene expression analysis implicates the immune response and lymphangiogenesis in the pathogenesis of fetal chylothorax.

Chen-Hsiang Yeang, Gwo-Chin Ma, Jin-Chung Shih, Yu-Shih Yang, Chih-Ping Chen, Shun-Ping Chang, Sheng-Hai Wu, Chin-San Liu, Shou-Jen Kuo, Hung-Chieh Chou and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Genetics of lymphatic anomalies.The Journal of clinical investigation · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 9 institutions in 4 countries.

Chen-Hsiang YeangInstitute of Statistical Science, Academia Sinica, Taipei, Taiwan.
Gwo-Chin Ma
Jin-Chung Shih
Yu-Shih Yang
Chih-Ping Chen
Shun-Ping Chang
Sheng-Hai Wu
Chin-San Liu
Shou-Jen Kuo
Hung-Chieh Chou
Wuh-Liang Hwu
Alan D Cameron
Norman A Ginsberg
Yi-Shing Lin
Ming Chen
Changhua Christian Hospital · TWNational Chung Hsing University · TWNational Taiwan University · TWNational Taiwan University Hospital · TWBristol-Myers Squibb (Switzerland) · CHInstitute of Statistical Science, Academia Sinica · TWMackay Memorial Hospital · TWNorthwestern University · USSouthern General Hospital · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fetal chylothorax (FC) is a rare condition characterized by lymphocyte-rich pleural effusion. Although its pathogenesis remains elusive, it may involve inflammation, since there are increased concentrations of proinflammatory mediators in pleural fluids. Only a few hereditary lymphedema-associated gene loci, e.g. VEGFR3, ITGA9 and PTPN11, were detected in human fetuses with this condition; these cases had a poorer prognosis, due to defective lymphangiogenesis. In the present study, genome-wide gene expression analysis was conducted, comparing pleural and ascitic fluids in three hydropic fetuses, one with and two without the ITGA9 mutation. One fetus (the index case), from a dizygotic pregnancy (the cotwin was unaffected), received antenatal OK-432 pleurodesis and survived beyond the neonatal stage, despite having the ITGA9 mutation. Genes and pathways involved in the immune response were universally up-regulated in fetal pleural fluids compared to those in ascitic fluids. Furthermore, genes involved in the lymphangiogenesis pathway were down-regulated in fetal pleural fluids (compared to ascitic fluid), but following OK-432 pleurodesis, they were up-regulated. Expression of ITGA9 was concordant with overall trends of lymphangiogenesis. In conclusion, we inferred that both the immune response and lymphangiogenesis were implicated in the pathogenesis of fetal chylothorax. Furthermore, genome-wide gene expression microarray analysis may facilitate personalized medicine by selecting the most appropriate treatment, according to the specific circumstances of the patient, for this rare, but heterogeneous disease.

Indexed as

ChylothoraxFemaleFetal DiseasesForkhead Transcription FactorsGene Expression ProfilingGene Expression RegulationGenome-Wide Association StudyGenotypeHumansIntegrinsLymphangiogenesisMutationPregnancyProtein Tyrosine Phosphatase, Non-Receptor Type 11Ultrasonography, PrenatalVascular Endothelial Growth Factor Receptor-3Forkhead Transcription FactorsIntegrinsITGA9 protein, humanmesenchyme fork head 1 proteinProtein Tyrosine Phosphatase, Non-Receptor Type 11PTPN11 protein, humanVascular Endothelial Growth Factor Receptor-3

Identifiers

PMID22529953
PMCPMC3329545
OpenAlexW1996817931

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.