Evidence map›Paper›PMID 22526919›Full record

ArticleMolecular medicine (Cambridge, Mass.)2012

Mammalian DNA is an endogenous danger signal that stimulates local synthesis and release of complement factor B.

David J Kaczorowski, Melanie J Scott, John P Pibris, Amin Afrazi, Atsunori Nakao, Rebecca D Edmonds, Sodam Kim, Joon H Kwak, Yujian Liu, Jie Fan and 1 more

Open access · goldAbstract read
In one paragraph

Article in Molecular medicine (Cambridge, Mass.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Trial
  2. Article
  3. Beyond a Biomarker: Investigations of a Proinflammatory Role for Cell-Free DNA in Liver Transplant Ischemia and Reperfusion.Transplant international : official journal of the European Society for Organ Transplantation · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

David J KaczorowskiDivision of Cardiovascular Surgery, University of Pennsylvania, Philadelphia, PA, United States of America.
Melanie J Scott
John P Pibris
Amin Afrazi
Atsunori Nakao
Rebecca D Edmonds
Sodam Kim
Joon H Kwak
Yujian Liu
Jie Fan
Timothy R Billiar
University of Pittsburgh Medical Center · USUPMC Presbyterian · USVA Pittsburgh Healthcare System · USUniversity of Pennsylvania · US

Funding

Regulation of Intestinal Mucosal Injury & Repair After Trauma/Hemorrhagic ShockP50GM053789 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WATKINS, SIMON C · 1997 to 2013
$18.0M
Regulation of TLR4 Signaling in Enterocytes in Necrotizing EnterocolitisF30DK085930 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI AFRAZI, AMIN · 2009 to 2013
$234k
NIDDK NIH HHS F30 DK085930NIGMS NIH HHS P50 GM053789NIGMS NIH HHS P50-GM-53789
6 · The paper itself

Abstract

Complement factor B plays a critical role in ischemic tissue injury and autoimmunity. Factor B is dynamically synthesized and released by cells outside of the liver, but the molecules that trigger local factor B synthesis and release during endogenous tissue injury have not been identified. We determined that factor B is upregulated early after cold ischemia-reperfusion in mice, using a heterotopic heart transplant model. These data suggested upregulation of factor B by damage-associated molecular patterns (DAMPs), but multiple common DAMPs did not induce factor B in RAW264.7 mouse macrophages. However, exogenous DNA induced factor B mRNA and protein expression in RAW cells in vitro, as well as in peritoneal and alveolar macrophages in vivo. To determine the cellular mechanisms involved in DNA-induced factor B upregulation we then investigated the role of multiple known DNA receptors or binding partners. We stimulated peritoneal macrophages from wild-type (WT), toll-like receptor 9 (TLR9)-deficient, receptor for advanced glycation end products (RAGE)⁻/⁻ and myeloid differentiation factor 88 (MyD88)⁻/⁻ mice, or mouse macrophages deficient in high-mobility group box proteins (HMGBs), DNA-dependent activator of interferon-regulatory factors (DAI) or absent in melanoma 2 (AIM2), with DNA in the presence or absence of lipofection reagent. Reverse transcription-polymerase chain reaction, Western blotting and immunocytochemical analysis were employed for analysis. Synthesis of factor B was independent of TLR9, RAGE, DAI and AIM2, but was dependent on HMGBs, MyD88, p38 and NF-κB. Our data therefore show that mammalian DNA is an endogenous molecule that stimulates factor B synthesis and release from macrophages via HMGBs, MyD88, p38 and NF-κB signaling. This activation of the immune system likely contributes to damage following sterile injury such as hemorrhagic shock and ischemia-reperfusion.

Indexed as

AnimalsCell LineComplement Factor BDNADNA-Binding ProteinsGlycoproteinsHMGB ProteinsMacrophagesMaleMiceMice, Inbred C57BLMice, KnockoutMitogen-Activated Protein KinasesMyeloid Differentiation Factor 88Myocardial Reperfusion InjuryNF-kappa BAim2 protein, mouseComplement Factor BDNADNA-Binding ProteinsGlycoproteinsHMGB ProteinsMitogen-Activated Protein KinasesMyeloid Differentiation Factor 88NF-kappa BNuclear ProteinsRNA-Binding ProteinsToll-Like Receptor 9Zbp1 protein, mouse

Identifiers

PMID22526919
PMCPMC3409274
OpenAlexW1585880825

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.