Evidence map›Paper›PMID 22526497›Full record

ArticlePlanta2012

The perichromatin region of the plant cell nucleus is the area with the strongest co-localisation of snRNA and SR proteins.

Janusz Niedojadło, Zbigniew Mikulski, Konrad Dełeńko, Adriana Szmidt-Jaworska, Dariusz J Smoliński, Alan L Epstein

Open access · hybridAbstract read
In one paragraph

Article in Planta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Function of Cajal Bodies in Nuclear RNA Retention inInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Janusz NiedojadłoDepartment of Cell Biology, Institute of General and Molecular Biology, Nicolaus Copernicus University, Ul. Gagarina 9, 87-100, Torun, Poland. janiaszn@umk.pl
Zbigniew Mikulski
Konrad Dełeńko
Adriana Szmidt-Jaworska
Dariusz J Smoliński
Alan L Epstein
Nicolaus Copernicus University · PLKeck Hospital of USC · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The spatial organisation of the splicing system in plant cells containing either reticular (Allium cepa) or chromocentric (Lupinus luteus) nuclei was studied by immunolabelling of SR proteins, snRNA, and the PANA antigen, known markers for interchromatin granule clusters in mammalian cells. Electron microscope results allowed us to determine the distribution of these molecules within the structural domains of the nucleus. Similar to animal cells, in both plant species SR proteins were localised in interchromatin granules, but contrary to animal cells contained very small amounts of snRNA. The area with the strongest snRNA and SR protein co-localisation was the perichromatin region, which may be the location of pre-mRNA splicing in the plant cell nuclei. The only observable differences in the organisation of reticular and chromocentric nuclei were the size of the speckles and the number of snRNA pools in the condensed chromatin. We conclude that, despite remarkable changes in the nuclear architecture, the organisation of the splicing system is remarkably similar in both types of plant cell nuclei.

Indexed as

Cell NucleusChromatinElectron Microscope TomographyHeLa CellsHumansIn Situ Hybridization, FluorescenceLupinusNuclear ProteinsOnionsPlant ProteinsPlant RootsRNA PrecursorsRNA, Small NuclearRNA SplicingChromatinNuclear ProteinsPlant ProteinsRNA PrecursorsRNA, Small Nuclear

Identifiers

PMID22526497
PMCPMC3404291
OpenAlexW2063239767

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.