Evidence map›Paper›PMID 22525748›Full record

ArticleActa crystallographica. Section D, Biological crystallography2012

X-ray-excited optical luminescence of protein crystals: a new tool for studying radiation damage during diffraction data collection.

Robin L Owen, Briony A Yorke, Arwen R Pearson

Abstract read
In one paragraph

Article in Acta crystallographica. Section D, Biological crystallography, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Robin L OwenDiamond Light Source, Harwell Science and Innovation Campus, Didcot, Oxfordshire OX11 0DE, England. robin.owen@diamond.ac.uk
Briony A Yorke
Arwen R Pearson

Funding

Biotechnology and Biological Sciences Research Council BB/H001905/1Wellcome Trust 089312
6 · The paper itself

Abstract

During X-ray irradiation protein crystals radiate energy in the form of small amounts of visible light. This is known as X-ray-excited optical luminescence (XEOL). The XEOL of several proteins and their constituent amino acids has been characterized using the microspectrophotometers at the Swiss Light Source and Diamond Light Source. XEOL arises primarily from aromatic amino acids, but the effects of local environment and quenching within a crystal mean that the XEOL spectrum of a crystal is not the simple sum of the spectra of its constituent parts. Upon repeated exposure to X-rays XEOL spectra decay non-uniformly, suggesting that XEOL is sensitive to site-specific radiation damage. However, rates of XEOL decay were found not to correlate to decays in diffracting power, making XEOL of limited use as a metric for radiation damage to protein crystals.

Indexed as

Amino AcidsAnimalsApoferritinsChickensCrystallizationEscherichia coliHorsesLuminescenceMuramidaseOxo-Acid-LyasesProteinsThermolysinX-Ray DiffractionX-RaysAmino AcidsApoferritinshen egg lysozymeMuramidaseN-acetylneuraminate lyaseOxo-Acid-LyasesProteinsThermolysin

Identifiers

PMID22525748
PMCPMC3370260

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.