Evidence map›Paper›PMID 22523428›Full record

SynthesisAnnals of the rheumatic diseases2012

Variation in the ICAM1-ICAM4-ICAM5 locus is associated with systemic lupus erythematosus susceptibility in multiple ancestries.

Kwangwoo Kim, Elizabeth E Brown, Chan-Bum Choi, Marta E Alarcón-Riquelme, BIOLUPUS, Jennifer A Kelly, Stuart B Glenn, Joshua O Ojwang, Adam Adler, Hye-Soon Lee and 42 more

Open access · bronzeAbstract readMeta-AnalysisMulticenter Study
In one paragraph

Synthesis in Annals of the rheumatic diseases, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 2 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 2 syntheses or guidelines pooled it, 66 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Immunogenetics of Lupus Erythematosus.Advances in experimental medicine and biology · 2022
    Article
  9. Lupus Nephritis: Current Perspectives and Moving Forward.Journal of inflammation research · 2022
    Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Updates in Lupus Genetics.Current rheumatology reports · 2017
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

52 authors at 20 institutions in 7 countries.

Kwangwoo Kim1Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, Korea.
Elizabeth E Brown
Chan-Bum Choi
Marta E Alarcón-Riquelme
BIOLUPUS
Jennifer A Kelly
Stuart B Glenn
Joshua O Ojwang
Adam Adler
Hye-Soon Lee
Susan A Boackle
Lindsey A Criswell
Graciela S Alarcón
Jeffrey C Edberg
Anne M Stevens
Chaim O Jacob
Gary S Gilkeson
Diane L Kamen
Betty P Tsao
Juan-Manuel Anaya
Joel M Guthridge
Swapan K Nath
Bruce Richardson
Amr H Sawalha
Young Mo Kang
Seung Cheol Shim
Chang-Hee Suh
Soo-Kon Lee
Chang-sik Kim
Joan T Merrill
Michelle Petri
Rosalind Ramsey-Goldman
Luis M Vilá
Timothy B Niewold
Javier Martin
Bernardo A Pons-Estel
GENLES
Timothy J Vyse
Barry I Freedman
Kathy L Moser
Patrick M Gaffney
Adrienne Williams
Mary Comeau
John D Reveille
Judith A James
R Hal Scofield
Carl D Langefeld
Kenneth M Kaufman
John B Harley
Changwon Kang
Robert P Kimberly
Sang-Cheol Bae
Oklahoma Medical Research Foundation · USUniversity of Alabama at Birmingham · USWake Forest University · USHanyang University Seoul Hospital · KRUnited States Department of Veterans Affairs · USUniversity of Oklahoma Health Sciences Center · USKorea Advanced Institute of Science and Technology · KRMedical University of South Carolina · USAjou University · KRCentro Científico Tecnólogico - Rosario · ARChungnam National University · KREulji University · KRGuy's Hospital · GBInstituto de Parasitología y Biomedicina "López - Neyra" · ESJohns Hopkins Medicine · USKyungpook National University · KRNorthwestern University · USPfizer-University of Granada-Junta de Andalucía Centre for Genomics and Oncological Research · ESThe University of Texas Health Science Center at Houston · USUniversidad del Rosario · CO

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Institute for Clinical and Translational Research (UL1)UL1RR025005 · NCRR · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2007 to 2011
$75.8M
ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI LIU, CAMBRIAN YANGSHAO · 1990 to 2025
$29.8M
U OF TEXAS HLTH SCI CTR HOUSTON CENTER FOR CLINICAL AND TRANSLATIONAL SCIENCESUL1RR024148 · NCRR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MCPHERSON, DAVID D · 2006 to 2010
$27.9M
ZD1839 FOR MALIGNANT ASTROCYTOMA OR GLIOBLASTOMA AND MENINGIOMAM01RR000079 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KESSLER, DAVID A · 1985 to 2006
$26.0M
TRANSLATIONAL RESEARCH UNIVERSITY OF CHICAGO: CLINICAL TRIALSUL1RR024999 · NCRR · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2007 to 2011
$25.3M
MULTIDISCIPLINARY CLINICAL AND TRANSLATIONAL SCIENCE (MCTS) PROGRAM (UL1)UL1RR025741 · NCRR · NORTHWESTERN UNIVERSITY AT CHICAGO · PI GREENLAND, PHILIP · 2008 to 2011
$24.7M
UAB CENTER FOR CLINICAL AND TRANSLATIONAL SCIENCE (CCTS) UL1: BPCAUL1RR025777 · NCRR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GUAY-WOODFORD, LISA MARIE · 2008 to 2011
$22.3M
THE EFFECTS OF ERK PATHWAY INHIBITION ON DNA METHYLATION IN SLEP20RR015577 · NCRR · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI CENTOLA, MICHAEL B · 2000 to 2009
$21.5M
VALIDATING NOVEL GENES IMPLICATED IN LEUKOCYTE CHEMOTAXISP20RR020143 · NCRR · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI GAFFNEY, PATRICK M · 2004 to 2011
$21.0M
Colorado Clinical and Translational Science Institute (UL1)UL1TR000154 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2012 to 2013
$20.4M
Program Project in the Genetics of SLEP01AR049084 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KIMBERLY, ROBERT P. · 2002 to 2012
$12.7M
NCATS NIH HHS UL1 TR000062NCATS NIH HHS UL1 TR000154NCI NIH HHS CA141700-01NCI NIH HHS P30 CA046934NCI NIH HHS R01 CA141700NCRR NIH HHS 5UL1RR025777NCRR NIH HHS M01 RR000079NCRR NIH HHS M01-RR00079NCRR NIH HHS P20 RR015577NCRR NIH HHS P20 RR020143NCRR NIH HHS RR015577NCRR NIH HHS RR020143NCRR NIH HHS UL1 RR024148NCRR NIH HHS UL1 RR024999NCRR NIH HHS UL1RR024999NCRR NIH HHS UL1 RR025005NCRR NIH HHS UL1RR025005NCRR NIH HHS UL1 RR025741NCRR NIH HHS UL1RR025741NCRR NIH HHS UL1 RR025777NCRR NIH HHS UL1 RR029882NCRR NIH HHS UL1RR029882NIAID NIH HHS AI063622NIAID NIH HHS AI071651NIAID NIH HHS AI082714NIAID NIH HHS AI083194NIAID NIH HHS AI094377NIAID NIH HHS AI24717NIAID NIH HHS K08 AI083790NIAID NIH HHS K08-AI083790NIAID NIH HHS K24 AI078004NIAID NIH HHS L30 AI071651NIAID NIH HHS P01 AI083194NIAID NIH HHS R01 AI024717NIAID NIH HHS R01 AI063622NIAID NIH HHS R21 AI070304NIAID NIH HHS R21-AI070304NIAID NIH HHS R21 AI094377NIAID NIH HHS R37 AI024717NIAID NIH HHS U19 AI082714NIAMS NIH HHS AR042460NIAMS NIH HHS AR043274NIAMS NIH HHS AR043814NIAMS NIH HHS AR044804NIAMS NIH HHS AR048940NIAMS NIH HHS AR052300NIAMS NIH HHS AR053483NIAMS NIH HHS AR058554NIAMS NIH HHS AR060366NIAMS NIH HHS AR43727NIAMS NIH HHS K24 AR002138NIAMS NIH HHS K24-AR002138NIAMS NIH HHS N01 AR062277NIAMS NIH HHS N01-AR-6-227NIAMS NIH HHS P01 AR049084NIAMS NIH HHS P01-AR49084NIAMS NIH HHS P30 AR053483NIAMS NIH HHS P30-AR055385NIAMS NIH HHS P50 AR048940NIAMS NIH HHS P60-2-AR30692NIAMS NIH HHS P60 AR030692NIAMS NIH HHS P60 AR049459NIAMS NIH HHS P60-AR049459NIAMS NIH HHS P60 AR053308NIAMS NIH HHS P60-AR053308NIAMS NIH HHS P60 AR062755NIAMS NIH HHS R01 AR033062NIAMS NIH HHS R01 AR042460NIAMS NIH HHS R01 AR042525NIAMS NIH HHS R01 AR043274NIAMS NIH HHS R01 AR043727NIAMS NIH HHS R01 AR043814NIAMS NIH HHS R01 AR044804NIAMS NIH HHS R01 AR052300NIAMS NIH HHS R01 AR057172NIAMS NIH HHS R01 AR060366NIAMS NIH HHS R01-AR33062NIAMS NIH HHS RC1 AR058554NICHD NIH HHS HD07463NICHD NIH HHS T32 HD007463NIDDK NIH HHS P30 DK042086NIDDK NIH HHS P30-DK42086NIGMS NIH HHS GM063483NIGMS NIH HHS T32 GM063483OCPHP CDC HHS PR094002
6 · The paper itself

Abstract

objectiveSystemic lupus erythematosus (SLE; OMIM 152700) is a chronic autoimmune disease for which the aetiology includes genetic and environmental factors. ITGAM, integrin α(M) (complement component 3 receptor 3 subunit) encoding a ligand for intracellular adhesion molecule (ICAM) proteins, is an established SLE susceptibility locus. This study aimed to evaluate the independent and joint effects of genetic variations in the genes that encode ITGAM and ICAM.

methodsThe authors examined several markers in the ICAM1-ICAM4-ICAM5 locus on chromosome 19p13 and the single ITGAM polymorphism (rs1143679) using a large-scale case-control study of 17 481 unrelated participants from four ancestry populations. The single-marker association and gene-gene interaction were analysed for each ancestry, and a meta-analysis across the four ancestries was performed.

resultsThe A-allele of ICAM1-ICAM4-ICAM5 rs3093030, associated with elevated plasma levels of soluble ICAM1, and the A-allele of ITGAM rs1143679 showed the strongest association with increased SLE susceptibility in each of the ancestry populations and the trans-ancestry meta-analysis (OR(meta)=1.16, 95% CI 1.11 to 1.22; p=4.88×10(-10) and OR(meta)=1.67, 95% CI 1.55 to 1.79; p=3.32×10(-46), respectively). The effect of the ICAM single-nucleotide polymorphisms (SNPs) was independent of the effect of the ITGAM SNP rs1143679, and carriers of both ICAM rs3093030-AA and ITGAM rs1143679-AA had an OR of 4.08 compared with those with no risk allele in either SNP (95% CI 2.09 to 7.98; p=3.91×10(-5)).

conclusionThese findings are the first to suggest that an ICAM-integrin-mediated pathway contributes to susceptibility to SLE.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyPolymorphism, Single NucleotideCell Adhesion MoleculesGenetic MarkersGenetics, PopulationHumansIntercellular Adhesion Molecule-1Lupus Erythematosus, SystemicNerve Tissue ProteinsRacial GroupsCell Adhesion MoleculesGenetic MarkersICAM1 protein, humanICAM4 protein, humanICAM5 protein, humanIntercellular Adhesion Molecule-1Nerve Tissue Proteins

Identifiers

PMID22523428
PMCPMC3466387
OpenAlexW2105044812

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.