Evidence map›Paper›PMID 22522903›Full record

ArticleJournal of bacteriology2012

Effects of lipopolysaccharide biosynthesis mutations on K1 polysaccharide association with the Escherichia coli cell surface.

Natalia Jiménez, Sofya N Senchenkova, Yuriy A Knirel, Giuseppina Pieretti, Maria M Corsaro, Eleonora Aquilini, Miguel Regué, Susana Merino, Juan M Tomás

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Natalia JiménezDepartamento de Microbiología, Facultad de Biología, Universidad de Barcelona, Barcelona, Spain.
Sofya N Senchenkova
Yuriy A Knirel
Giuseppina Pieretti
Maria M Corsaro
Eleonora Aquilini
Miguel Regué
Susana Merino
Juan M Tomás
Universitat de Barcelona · ESN.D. Zelinsky Institute of Organic Chemistry · RUUniversity of Naples Federico II · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The presence of cell-bound K1 capsule and K1 polysaccharide in culture supernatants was determined in a series of in-frame nonpolar core biosynthetic mutants from Escherichia coli KT1094 (K1, R1 core lipopolysaccharide [LPS] type) for which the major core oligosaccharide structures were determined. Cell-bound K1 capsule was absent from mutants devoid of phosphoryl modifications on L-glycero-D-manno-heptose residues (HepI and HepII) of the inner-core LPS and reduced in mutants devoid of phosphoryl modification on HepII or devoid of HepIII. In contrast, in all of the mutants, K1 polysaccharide was found in culture supernatants. These results were confirmed by using a mutant with a deletion spanning from the hldD to waaQ genes of the waa gene cluster to which individual genes were reintroduced. A nuclear magnetic resonance (NMR) analysis of core LPS from HepIII-deficient mutants showed an alteration in the pattern of phosphoryl modifications. A cell extract containing both K1 capsule polysaccharide and LPS obtained from an O-antigen-deficient mutant could be resolved into K1 polysaccharide and core LPS by column chromatography only when EDTA and deoxycholate (DOC) buffer were used. These results suggest that the K1 polysaccharide remains cell associated by ionically interacting with the phosphate-negative charges of the core LPS.

Indexed as

MutationAntigens, BacterialBacterial CapsulesCell MembraneCulture Media, ConditionedEscherichia coliEscherichia coli ProteinsHeptosesLipopolysaccharidesMagnetic Resonance SpectroscopyO AntigensPolysaccharides, BacterialSpectrometry, Mass, Electrospray IonizationAntigens, Bacterialcapsular polysaccharide K1Culture Media, ConditionedEscherichia coli Proteinsglycero-manno-heptoseHeptosesLipopolysaccharidesO AntigensPolysaccharides, Bacterial

Identifiers

PMID22522903
PMCPMC3434737
OpenAlexW2031942461

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.