Evidence map›Paper›PMID 22522705›Full record

ArticleThe EMBO journal2012

Mmi1 RNA surveillance machinery directs RNAi complex RITS to specific meiotic genes in fission yeast.

Edwige Hiriart, Aurélia Vavasseur, Leila Touat-Todeschini, Akira Yamashita, Benoit Gilquin, Emeline Lambert, Jonathan Perot, Yuichi Shichino, Nicolas Nazaret, Cyril Boyault and 4 more

Abstract read
In one paragraph

Article in The EMBO journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed, 1 pooled it
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 1 synthesis or guideline pooled it, 90 citations in OpenAlex.

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6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Edwige HiriartINSERM, U823, Université Joseph Fourier - Grenoble 1, Institut Albert Bonniot, Faculté de Médecine, Domaine de la Merci, La Tronche Cedex, France.
Aurélia Vavasseur
Leila Touat-Todeschini
Akira Yamashita
Benoit Gilquin
Emeline Lambert
Jonathan Perot
Yuichi Shichino
Nicolas Nazaret
Cyril Boyault
Joel Lachuer
Daniel Perazza
Masayuki Yamamoto
André Verdel
Université Grenoble Alpes · FRInserm · FRTokyo University of Science · JPInstitut pour l'avancée des biosciences · FRUniversité Claude Bernard Lyon 1 · FRUniversité Joseph Fourier · FR

Funding

European Research Council 210896
6 · The paper itself

Abstract

RNA interference (RNAi) silences gene expression by acting both at the transcriptional and post-transcriptional levels in a broad range of eukaryotes. In the fission yeast Schizosaccharomyces pombe the RNA-Induced Transcriptional Silencing (RITS) RNAi complex mediates heterochromatin formation at non-coding and repetitive DNA. However, the targeting and role of RITS at other genomic regions, including protein-coding genes, remain unknown. Here we show that RITS localizes to specific meiotic genes and mRNAs. Remarkably, RITS is guided to these meiotic targets by the RNA-binding protein Mmi1 and its associated RNA surveillance machinery that together degrade selective meiotic mRNAs during vegetative growth. Upon sexual differentiation, RITS localization to the meiotic genes and mRNAs is lost. Large-scale identification of Mmi1 RNA targets reveals that RITS subunit Chp1 associates with the vast majority of them. In addition, loss of RNAi affects the effective repression of sexual differentiation mediated by the Mmi1 RNA surveillance machinery. These findings uncover a new mechanism for recruiting RNAi to specific meiotic genes and suggest that RNAi participates in the control of sexual differentiation in fission yeast.

Indexed as

Gene Expression Regulation, FungalGenes, FungalModels, BiologicalmRNA Cleavage and Polyadenylation FactorsProtein BindingRNA, FungalRNA-Induced Silencing ComplexSchizosaccharomycesSchizosaccharomyces pombe ProteinsMmi1 protein, S pombemRNA Cleavage and Polyadenylation FactorsRNA, FungalRNA-Induced Silencing ComplexSchizosaccharomyces pombe Proteins

Identifiers

PMID22522705
PMCPMC3364741
OpenAlexW2099358398

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.