Evidence map›Paper›PMID 22521722›Full record

ArticleDevelopmental cell2012

Structural basis of the intracellular sorting of the SNARE VAMP7 by the AP3 adaptor complex.

Helen M Kent, Philip R Evans, Ingmar B Schäfer, Sally R Gray, Christopher M Sanderson, J Paul Luzio, Andrew A Peden, David J Owen

Open access · hybridAbstract read
In one paragraph

Article in Developmental cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 61 citations in OpenAlex.

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  11. Spatiotemporal dissection of theJournal of cell science · 2019
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  18. Subcellular Trafficking of Mammalian Lysosomal Proteins: An Extended View.International journal of molecular sciences · 2016
    Review
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Helen M KentMedical Research Council Laboratory of Molecular Biology, Hills Road, Cambridge CB2 2QH, UK.
Philip R Evans
Ingmar B Schäfer
Sally R Gray
Christopher M Sanderson
J Paul Luzio
Andrew A Peden
David J Owen
Addenbrooke's Hospital · GBMedical Research Council · GBMRC Laboratory of Molecular Biology · GBUniversity of Cambridge · GB

Funding

Medical Research Council G0900113Medical Research Council G120/952Medical Research Council MC_U105178845Medical Research Council U105178845Wellcome Trust 079895Wellcome Trust 090909
6 · The paper itself

Abstract

VAMP7 is involved in the fusion of late endocytic compartments with other membranes. One possible mechanism of VAMP7 delivery to these late compartments is via the AP3 trafficking adaptor. We show that the linker of the δ-adaptin subunit of AP3 binds the VAMP7 longin domain and determines the structure of their complex. Mutation of residues on both partners abolishes the interaction in vitro and in vivo. The binding of VAMP7 to δ-adaptin requires the VAMP7 SNARE motif to be engaged in SNARE complex formation and hence AP3 must transport VAMP7 when VAMP7 is part of a cis-SNARE complex. The absence of δ-adaptin causes destabilization of the AP3 complex in mouse mocha fibroblasts and mislocalization of VAMP7. The mislocalization can be rescued by transfection with wild-type δ-adaptin but not by δ-adaptin containing mutations that abolish VAMP7 binding, despite in all cases intact AP3 being present and LAMP1 trafficking being rescued.

Indexed as

Adaptor Protein Complex 3Adaptor Protein Complex delta SubunitsAmino Acid SequenceAnimalsCell LineCell MembraneCrystallography, X-RayEndocytosisEndosomesFibroblastsFlow CytometryHumansMiceMolecular Sequence DataMutationProtein BindingAdaptor Protein Complex 3Adaptor Protein Complex delta SubunitsR-SNARE ProteinsSybl1 protein, mouse

Identifiers

PMID22521722
PMCPMC3549491
OpenAlexW2138896791

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.