Evidence map›Paper›PMID 22516082›Full record

ArticleMolecular immunology2012

B cell receptor light chain repertoires show signs of selection with differences between groups of healthy individuals and SLE patients.

Nathan Schoettler, Dongyao Ni, Martin Weigert

Abstract read
In one paragraph

Article in Molecular immunology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. The analysis of clonal expansions in normal and autoimmune B cell repertoires.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2015
    Review
  5. Light chain editors of anti-DNA receptors in human B cells.The Journal of experimental medicine · 2014
    Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Nathan SchoettlerGwen Knapp Center for Lupus and Immunology Research, The University of Chicago, IL 60637, USA.
Dongyao Ni
Martin Weigert

Funding

THE GENETIC CONTROL OF ANTIBODY DIVERSITY AND EXPRESSIONR01GM020964 · NIGMS · UNIVERSITY OF CHICAGO · PI WEIGERT, MARTIN G · 1985 to 2011
$5.7M
GENETIC CONTROL OF THE ANTIBODY STRUCTURER37GM020964 · NIGMS · PRINCETON UNIVERSITY · PI WEIGERT, MARTIN G · 1987 to 1996
–
NIGMS NIH HHS GM020964NIGMS NIH HHS R01 GM020964
6 · The paper itself

Abstract

We have developed a microarray to study the expression of L-chain V genes (V(L) genes) in healthy and SLE patient peripheral κ- and λ-sorted B cells. In all repertoires tested, one V(L) gene accounts for over 10% of all gene V(L) expression, consistent with positive selection acting on L-chains. While a few V(L) genes were highly expressed in all individuals, most V(L) genes were expressed at different levels. Some V(L) genes (5 out of a total of 78) were not detected. We attribute their absence from the repertoire to negative selection. Positive selection and negative selection were also found in SLE repertoires, but expression of V(L) genes was different; the differences point to less regulation of V(L) gene repertoires in SLE. Our data shows that V(L) gene expression is variable and supports a model where the L-chain repertoire is generated by both positive and negative selection on L-chains.

Indexed as

Genes, ImmunoglobulinAnimalsBase SequenceB-LymphocytesCase-Control StudiesGene ExpressionHumansImmunoglobulin Light ChainsLupus Erythematosus, SystemicMiceMolecular Sequence DataPhenotypeReceptors, Antigen, B-CellImmunoglobulin Light ChainsReceptors, Antigen, B-Cell

Identifiers

PMID22516082
PMCPMC4264353

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.