Evidence map›Paper›PMID 22514673›Full record

ArticlePloS one2012

Identification and characterization of novel mutations in the human gene encoding the catalytic subunit Calpha of protein kinase A (PKA).

Kristoffer Søberg, Anja C V Larsen, Mandy Diskar, Paul H Backe, Magnar Bjørås, Tore Jahnsen, Jon K Laerdahl, Torbjørn Rognes, Friedrich W Herberg, Bjørn S Skålhegg

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Kristoffer SøbergDepartment of Nutrition, Institute of Basic Medical Sciences, University of Oslo, Oslo, Norway.
Anja C V Larsen
Mandy Diskar
Paul H Backe
Magnar Bjørås
Tore Jahnsen
Jon K Laerdahl
Torbjørn Rognes
Friedrich W Herberg
Bjørn S Skålhegg
University of Oslo · NOOslo University Hospital · NOUniversity of Kassel · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genes PRKACA and PRKACB encode the principal catalytic (C) subunits of protein kinase A (PKA) Cα and Cβ, respectively. Cα is expressed in all eukaryotic tissues examined and studies of Cα knockout mice demonstrate a crucial role for Cα in normal physiology. We have sequenced exon 2 through 10 of PRKACA from the genome of 498 Norwegian donors and extracted information about PRKACA mutations from public databases. We identified four interesting nonsynonymous point mutations, Arg45Gln, Ser109Pro, Gly186Val, and Ser263Cys, in the Cα1 splice variant of the kinase. Cα variants harboring the different amino acid mutations were analyzed for kinase activity and regulatory (R) subunit binding. Whereas mutation of residues 45 and 263 did not alter catalytic activity or R subunit binding, mutation of Ser(109) significantly reduced kinase activity while R subunit binding was unaltered. Mutation of Cα Gly(186) completely abrogated kinase activity and PKA type I but not type II holoenzyme formation. Gly(186) is located in the highly conserved DFG motif of Cα and mutation of this residue to Val was predicted to result in loss of binding of ATP and Mg(2+), which may explain the kinetic inactivity. We hypothesize that individuals born with mutations of Ser(109) or Gly(186) may be faced with abnormal development and possibly severe disease.

Indexed as

AnimalsCatalytic DomainCell LineChlorocebus aethiopsCOS CellsCyclic AMP-Dependent Protein Kinase Catalytic SubunitsExonsHumansImmunoblottingMutagenesis, Site-DirectedMutationPoint MutationCyclic AMP-Dependent Protein Kinase Catalytic SubunitsPRKACA protein, humanprotein kinase A Calpha

Identifiers

PMID22514673
PMCPMC3325940
OpenAlexW2004173572

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.