Evidence map›Paper›PMID 22514613›Full record

ArticlePloS one2012

The crest phenotype in chicken is associated with ectopic expression of HOXC8 in cranial skin.

Yanqiang Wang, Yu Gao, Freyja Imsland, Xiaorong Gu, Chungang Feng, Ranran Liu, Chi Song, Michèle Tixier-Boichard, David Gourichon, Qingyuan Li and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 65 citations in OpenAlex.

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  15. Parallel Genetic Origin of Foot Feathering in Birds.Molecular biology and evolution · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Yanqiang WangState Key Laboratory for Agrobiotechnology, China Agricultural University, Beijing, China.
Yu Gao
Freyja Imsland
Xiaorong Gu
Chungang Feng
Ranran Liu
Chi Song
Michèle Tixier-Boichard
David Gourichon
Qingyuan Li
Kuanwei Chen
Huifang Li
Leif Andersson
Xiaoxiang Hu
Ning Li
China Agricultural University · CNPoultry Research Institute · CNUppsala University · SEAgroParisTech · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Crest phenotype is characterised by a tuft of elongated feathers atop the head. A similar phenotype is also seen in several wild bird species. Crest shows an autosomal incompletely dominant mode of inheritance and is associated with cerebral hernia. Here we show, using linkage analysis and genome-wide association, that Crest is located on the E22C19W28 linkage group and that it shows complete association to the HOXC-cluster on this chromosome. Expression analysis of tissues from Crested and non-crested chickens, representing 26 different breeds, revealed that HOXC8, but not HOXC12 or HOXC13, showed ectopic expression in cranial skin during embryonic development. We propose that Crest is caused by a cis-acting regulatory mutation underlying the ectopic expression of HOXC8. However, the identification of the causative mutation(s) has to await until a method becomes available for assembling this chromosomal region. Crest is unfortunately located in a genomic region that has so far defied all attempts to establish a contiguous sequence.

Indexed as

AnimalsChickensFeathersFemaleGene Expression Regulation, DevelopmentalGenome-Wide Association StudyHomeodomain ProteinsMalePhenotypeSkinHomeodomain Proteins

Identifiers

PMID22514613
PMCPMC3326004
OpenAlexW2045865903

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.