Evidence map›Paper›PMID 22513725›Full record

ArticleJournal of the Royal Society, Interface2012

Real time forecasting of near-future evolution.

Philip J Gerrish, Paul D Sniegowski

Abstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Cancer in light of experimental evolution.Current biology : CB · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Philip J GerrishCenter for Evolutionary and Theoretical Immunology, Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA. pgerrish@unm.edu
Paul D Sniegowski

Funding

Mutation rate catastrophe: testing a novel theory for the extinction of clonal orR01GM079483 · NIGMS · UNIVERSITY OF NEW MEXICO · PI GERRISH, PHILIP JOHN · 2008 to 2010
$1.1M
The specialized role of Hsp70 in protein importF32GM079843 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI LEE, THOMAS · 2007 to 2008
$99k
NIGMS NIH HHS F32 GM079843NIGMS NIH HHS R01 GM079483NIGMS NIH HHS R01GM079483-02S1NIGMS NIH HHS R01 GM079843-01
6 · The paper itself

Abstract

A metaphor for adaptation that informs much evolutionary thinking today is that of mountain climbing, where horizontal displacement represents change in genotype, and vertical displacement represents change in fitness. If it were known a priori what the 'fitness landscape' looked like, that is, how the myriad possible genotypes mapped onto fitness, then the possible paths up the fitness mountain could each be assigned a probability, thus providing a dynamical theory with long-term predictive power. Such detailed genotype-fitness data, however, are rarely available and are subject to change with each change in the organism or in the environment. Here, we take a very different approach that depends only on fitness or phenotype-fitness data obtained in real time and requires no a priori information about the fitness landscape. Our general statistical model of adaptive evolution builds on classical theory and gives reasonable predictions of fitness and phenotype evolution many generations into the future.

Indexed as

Biological EvolutionModels, BiologicalForecasting

Identifiers

PMID22513725
PMCPMC3405757

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.