Evidence map›Paper›PMID 22513452›Full record

ArticleGenes and immunity2012

CIITA gene variants are associated with rheumatoid arthritis in Scandinavian populations.

M C Eike, B Skinningsrud, M Ronninger, A Stormyr, T K Kvien, G Joner, P R Njølstad, O Førre, B Flatø, L Alfredsson and 3 more

Abstract read
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In one paragraph

Article in Genes and immunity, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. The Immunogenetics of Lichen Planus.Advances in experimental medicine and biology · 2022
    Article
  6. NOD-like receptors in autoimmune diseases.Acta pharmacologica Sinica · 2021
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

M C EikeDepartment of Medical Genetics, Oslo University Hospital and University of Oslo, Oslo, Norway. m.c.eike@medisin.uio.no
B Skinningsrud
M Ronninger
A Stormyr
T K Kvien
G Joner
P R Njølstad
O Førre
B Flatø
L Alfredsson
L Padyukov
D E Undlien
B A Lie
Oslo University Hospital · NOUniversity of Oslo · NOKarolinska Institutet · SEDiakonhjemmet Hospital · NOUniversity of Bergen · NO

Funding

Trial of risk mangement for prevention of accelerated atherosclerosis in SLEP60AR047782 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI LOSINA, ELENA · 2001 to 2016
$18.8M
NIAMS NIH HHS P60 AR047782
6 · The paper itself

Abstract

Expression of the major autoimmune risk loci DRB1 and DQB1 is regulated by the class II MHC (major histocompatibility complex) transactivator (CIITA), making the CIITA gene a strong autoimmune risk locus candidate. A CIITA promoter single-nucleotide polymorphism (SNP), rs3087456 (-168 A/G), has indeed been associated with several autoimmune diseases, including rheumatoid arthritis (RA). Recently, an intronic SNP rs8048002 has been suggested as a better susceptibility marker in Addison's disease. Therefore, we tested both SNPs in a panel of autoimmune diseases, consisting of Norwegian patients with RA (n=819), juvenile idiopathic arthritis (JIA; n=524), or type 1 diabetes (T1D; n=1211), and 2149 controls. We also included an independent Swedish RA cohort (n=2503) and controls (n=1416). Both rs3087456 and rs8048002 were significantly associated with RA (combined Norwegian and Swedish patients P(corrected)=0.012 and P(corrected)=0.0016, respectively), but not with JIA or T1D. Meta-analysis of 16 RA cohorts confirmed rs3087456 with only marginal significance (P=0.016). However, results were stronger in the Scandinavian subgroup (4 cohorts, P=3.8 × 10(-4)), indicating a population-dependent effect. A similar pattern was observed in a meta-analysis of rs8048002. Our results support involvement of CIITA in RA, but imply that this is population dependent and that the aetiological variant is yet to be discovered.

Indexed as

Genetic Predisposition to DiseaseAllelesArthritis, RheumatoidAutoantibodiesEpitopesGenotypeHumansLinkage DisequilibriumMeta-Analysis as TopicNuclear ProteinsPolymorphism, Single NucleotideScandinavian and Nordic CountriesTrans-ActivatorsWhite PeopleAutoantibodiesEpitopesMHC class II transactivator proteinNuclear ProteinsTrans-Activators

Identifiers

PMID22513452
OpenAlexW1976103964

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.