Evidence map›Paper›PMID 22509405›Full record

ArticlePloS one2012

The GPI anchor signal sequence dictates the folding and functionality of the Als5 adhesin from Candida albicans.

Mohammad Faiz Ahmad, Bhawna Yadav, Pravin Kumar, Amrita Puri, Mohit Mazumder, Anwar Ali, Samudrala Gourinath, Rohini Muthuswami, Sneha Sudha Komath

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Fungal Biofilms: Inside Out.Microbiology spectrum · 2017
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Mohammad Faiz AhmadSchool of Life Sciences, Jawaharlal Nehru University, New Delhi, India.
Bhawna Yadav
Pravin Kumar
Amrita Puri
Mohit Mazumder
Anwar Ali
Samudrala Gourinath
Rohini Muthuswami
Sneha Sudha Komath
Jawaharlal Nehru University · INJamia Millia Islamia · INInvisible Software (United States) · USUniversity of Delhi · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundProteins destined to be Glycosylphosphatidylinositol (GPI) anchored are translocated into the ER lumen completely before the C-terminal GPI anchor attachment signal sequence (SS) is removed by the GPI-transamidase and replaced by a pre-formed GPI anchor precursor. Does the SS have a role in dictating the conformation and function of the protein as well? METHODOLOGY/PRINCIPAL

findingsWe generated two variants of the Als5 protein without and with the SS in order to address the above question. Using a combination of biochemical and biophysical techniques, we show that in the case of Als5, an adhesin of C. albicans, the C-terminal deletion of 20 amino acids (SS) results in a significant alteration in conformation and function of the mature protein. CONCLUSIONS/SIGNIFICANCE: We propose that the locking of the conformation of the precursor protein in an alternate conformation from that of the mature protein is one probable strategy employed by the cell to control the behaviour and function of proteins intended to be GPI anchored during their transit through the ER.

Indexed as

Amino Acid SubstitutionCandida albicansCell Adhesion MoleculesCircular DichroismCollagen Type IVEndoplasmic ReticulumEscherichia coliFungal ProteinsGene Expression RegulationGlycosylphosphatidylinositolsProtein BindingProtein FoldingProtein Sorting SignalsProtein Structure, SecondaryALA1 protein, Candida albicansCell Adhesion MoleculesCollagen Type IVFungal ProteinsGlycosylphosphatidylinositolsProtein Sorting Signals

Identifiers

PMID22509405
PMCPMC3324464
OpenAlexW2054498748

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.