Evidence map›Paper›PMID 22508764›Full record

ArticleGenome research2012

Genome-wide phosphoacetylation of histone H3 at Drosophila enhancers and promoters.

Wendy A Kellner, Edward Ramos, Kevin Van Bortle, Naomi Takenaka, Victor G Corces

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
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  5. Review
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  7. Review
  8. Epigenetic regulation of post-embryonic development.Current opinion in insect science · 2021
    Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Polycomb inhibits histone acetylation by CBP by binding directly to its catalytic domain.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  15. Article
  16. Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Wendy A KellnerDepartment of Biology, Emory University, Atlanta, Georgia 30322, USA.
Edward Ramos
Kevin Van Bortle
Naomi Takenaka
Victor G Corces
Emory University · US

Funding

MOLECULAR BASIS OF SUPPRESSION IN DROSOPHILAR01GM035463 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI CORCES, VICTOR G. · 1986 to 2020
$10.7M
The insulator complex in higher-order chromatin organizationK01CA133106 · NCI · EMORY UNIVERSITY · PI RAMOS, EDWARD · 2008 to 2012
$671k
NCI NIH HHS K01 CA133106NIGMS NIH HHS GM35463NIGMS NIH HHS R01 GM035463
6 · The paper itself

Abstract

Transcription regulation is mediated by enhancers that bind sequence-specific transcription factors, which in turn interact with the promoters of the genes they control. Here, we show that the JIL-1 kinase is present at both enhancers and promoters of ecdysone-induced Drosophila genes, where it phosphorylates the Ser10 and Ser28 residues of histone H3. JIL-1 is also required for CREB binding protein (CBP)-mediated acetylation of Lys27, a well-characterized mark of active enhancers. The presence of these proteins at enhancers and promoters of ecdysone-induced genes results in the establishment of the H3K9acS10ph and H3K27acS28ph marks at both regulatory sequences. These modifications are necessary for the recruitment of 14-3-3, a scaffolding protein capable of facilitating interactions between two simultaneously bound proteins. Chromatin conformation capture assays indicate that interaction between the enhancer and the promoter is dependent on the presence of JIL-1, 14-3-3, and CBP. Genome-wide analyses extend these conclusions to most Drosophila genes, showing that the presence of JIL-1, H3K9acS10ph, and H3K27acS28ph is a general feature of enhancers and promoters in this organism.

Indexed as

Enhancer Elements, GeneticPromoter Regions, Genetic14-3-3 ProteinsAcetylationAnimalsChromatinChromatin ImmunoprecipitationCREB-Binding ProteinDrosophilaDrosophila ProteinsEcdysoneGene Expression RegulationGenome, InsectHistonesLysinePhosphorylation14-3-3 ProteinsChromatinCREB-Binding ProteinDrosophila ProteinsEcdysoneHistonesJIL-1 protein, DrosophilaLysineProtein Serine-Threonine KinasesSerine

Identifiers

PMID22508764
PMCPMC3371715
OpenAlexW2102468445

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.