Evidence map›Paper›PMID 22508729›Full record

ArticleGenes & development2012

In vivo Polycomb kinetics and mitotic chromatin binding distinguish stem cells from differentiated cells.

João Pedro Fonseca, Philipp A Steffen, Stefan Müller, James Lu, Anna Sawicka, Christian Seiser, Leonie Ringrose

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 73 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

João Pedro FonsecaInstitute of Molecular Biotechnology, Vienna, Austria.
Philipp A Steffen
Stefan Müller
James Lu
Anna Sawicka
Christian Seiser
Leonie Ringrose
Institute of Molecular Biotechnology · ATMedical University of Vienna · ATETH Zurich · CHJohann Radon Institute for Computational and Applied Mathematics · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epigenetic memory mediated by Polycomb group (PcG) proteins must be maintained during cell division, but must also be flexible to allow cell fate transitions. Here we quantify dynamic chromatin-binding properties of PH::GFP and PC::GFP in living Drosophila in two cell types that undergo defined differentiation and mitosis events. Quantitative fluorescence recovery after photobleaching (FRAP) analysis demonstrates that PcG binding has a higher plasticity in stem cells than in more determined cells and identifies a fraction of PcG proteins that binds mitotic chromatin with up to 300-fold longer residence times than in interphase. Mathematical modeling examines which parameters best distinguish stem cells from differentiated cells. We identify phosphorylation of histone H3 at Ser 28 as a potential mechanism governing the extent and rate of mitotic PC dissociation in different lineages. We propose that regulation of the kinetic properties of PcG-chromatin binding is an essential factor in the choice between stability and flexibility in the establishment of cell identities.

Indexed as

Cell DifferentiationMitosisAnimalsChromatinDrosophila melanogasterDrosophila ProteinsFluorescence Recovery After PhotobleachingGreen Fluorescent ProteinsHistonesModels, BiologicalPhosphorylationPolycomb-Group ProteinsRepressor ProteinsSerineStem CellsChromatinDrosophila ProteinsGreen Fluorescent ProteinsHistonesPolycomb-Group ProteinsRepressor ProteinsSerine

Identifiers

PMID22508729
PMCPMC3337459
OpenAlexW1974519181

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.