Evidence map›Paper›PMID 22506009›Full record

ArticlePloS one2012

B-RAF mutant alleles associated with Langerhans cell histiocytosis, a granulomatous pediatric disease.

Takeshi Satoh, Alexander Smith, Aurelien Sarde, Hui-chun Lu, Syed Mian, Sophie Mian, Celine Trouillet, Ghulam Mufti, Jean-Francois Emile, Franca Fraternali and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 68 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 2 pooled it
9.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 2 syntheses or guidelines pooled it, 154 citations in OpenAlex.

  1. Guideline
  2. Guideline
  3. Review
  4. Article
  5. Article
  6. Article
  7. Beyond BRAFCancer medicine · 2024
    Article
  8. Mechanism of neurodegeneration mediated by clonal inflammatory microglia.bioRxiv : the preprint server for biology · 2024
    Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Article
  16. Histiocytosis.Lancet (London, England) · 2021
    Review
  17. Article
  18. Review
  19. Review
  20. Review

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
    Mian, Sophie [corrected to Mian, Syed]
5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Takeshi SatohSchool of Medicine, Centre for Molecular and Cellular Biology of Inflammation (CMCBI), King's College London, London, United Kingdom.
Alexander Smith
Aurelien Sarde
Hui-chun Lu
Syed Mian
Sophie Mian
Celine Trouillet
Ghulam Mufti
Jean-Francois Emile
Franca Fraternali
Jean Donadieu
Frederic Geissmann
King's College London · GBAssistance Publique – Hôpitaux de Paris · FR

Funding

Arthritis Research UKMedical Research Council G0900867
6 · The paper itself

Abstract

backgroundLangerhans cell histiocytosis (LCH) features inflammatory granuloma characterised by the presence of CD1a+ dendritic cells or 'LCH cells'. Badalian-Very et al. recently reported the presence of a canonical (V600E)B-RAF mutation in 57% of paraffin-embedded biopsies from LCH granuloma. Here we confirm their findings and report the identification of two novel B-RAF mutations detected in LCH patients. METHODS AND

resultsMutations of B-RAF were observed in granuloma samples from 11 out of 16 patients using 'next generation' pyrosequencing. In 9 cases the mutation identified was (V600E)B-RAF. In 2 cases novel polymorphisms were identified. A somatic (600DLAT)B-RAF insertion mimicked the structural and functional consequences of the (V600E)B-RAF mutant. It destabilized the inactive conformation of the B-RAF kinase and resulted in increased ERK activation in 293 T cells. The (600DLAT)B-RAF and (V600E)B-RAF mutations were found enriched in DNA and mRNA from the CD1a+ fraction of granuloma. They were absent from the blood and monocytes of 58 LCH patients, with a lower threshold of sequencing sensitivity of 1%-2% relative mutation abundance. A novel germ line (T599A)B-RAF mutant allele was detected in one patient, at a relative mutation abundance close to 50% in the LCH granuloma, blood monocytes and lymphocytes. However, (T599A)B-RAF did not destabilize the inactive conformation of the B-RAF kinase, and did not induce increased ERK phosphorylation or C-RAF transactivation.

conclusionsOur data confirmed presence of the (V600E)B-RAF mutation in LCH granuloma of some patients, and identify two novel B-RAF mutations. They indicate that (V600E)B-RAF and (600DLAT)B-RAF mutations are somatic mutants enriched in LCH CD1a(+) cells and absent from the patient blood. Further studies are needed to assess the functional consequences of the germ-line (T599A)B-RAF allele.

Indexed as

MutationAllelesAmino Acid SequenceChildChild, PreschoolExtracellular Signal-Regulated MAP KinasesFemaleGenetic Predisposition to DiseaseGranulomaHEK293 CellsHistiocytosis, Langerhans-CellHumansInfantLymphocytesMaleMolecular Sequence DataBRAF protein, humanExtracellular Signal-Regulated MAP KinasesProto-Oncogene Proteins B-rafProto-Oncogene Proteins c-raf

Identifiers

PMID22506009
PMCPMC3323620
OpenAlexW2081151196

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.