Evidence map›Paper›PMID 22505997›Full record

ArticlePloS one2012

Membrane association of the PTEN tumor suppressor: molecular details of the protein-membrane complex from SPR binding studies and neutron reflection.

Siddharth Shenoy, Prabhanshu Shekhar, Frank Heinrich, Marie-Claire Daou, Arne Gericke, Alonzo H Ross, Mathias Lösche

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
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  6. The orchestrated signaling by PI3Kα and PTEN at the membrane interface.Computational and structural biotechnology journal · 2022
    Review
  7. Review
  8. Binding of CaStructure (London, England : 1993) · 2021
    Article
  9. Uncovering a membrane-distal conformation of KRAS available to recruit RAF to the plasma membrane.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  10. Article
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  17. Review
  18. Article
  19. Article
  20. Structural features and lipid binding domain of tubulin on biomimetic mitochondrial membranes.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Siddharth ShenoyPhysics Department, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.
Prabhanshu Shekhar
Frank Heinrich
Marie-Claire Daou
Arne Gericke
Alonzo H Ross
Mathias Lösche
Carnegie Mellon University · USNIST Center for Neutron Research · USUniversity of Massachusetts Chan Medical School · USWorcester Polytechnic Institute · US

Funding

Newly Identified Regulator of Neuronal DifferentiationR01NS021716 · NINDS · WORCESTER FOUNDATION FOR BIOMEDICAL RES · PI ROSS, ALONZO H · 1985 to 2014
$5.2M
STRUCTURAL&FUNCTIONAL INESTIGATIONS OF AB OLIGOMER INTERACTION/SYNTHETIC MEMBRANEP01AG032131 · NIA · CARNEGIE-MELLON UNIVERSITY · PI DESEMO, MARKUS · 2009 to 2011
$1.9M
NIA NIH HHS 1P01 AG032131NIA NIH HHS P01 AG032131NINDS NIH HHS 1R01 NS021716NINDS NIH HHS R01 NS021716
6 · The paper itself

Abstract

The structure and function of the PTEN phosphatase is investigated by studying its membrane affinity and localization on in-plane fluid, thermally disordered synthetic membrane models. The membrane association of the protein depends strongly on membrane composition, where phosphatidylserine (PS) and phosphatidylinositol diphosphate (PI(4,5)P(2)) act pronouncedly synergistic in pulling the enzyme to the membrane surface. The equilibrium dissociation constants for the binding of wild type (wt) PTEN to PS and PI(4,5)P(2) were determined to be K(d)∼12 µM and 0.4 µM, respectively, and K(d)∼50 nM if both lipids are present. Membrane affinities depend critically on membrane fluidity, which suggests multiple binding sites on the protein for PI(4,5)P(2). The PTEN mutations C124S and H93R show binding affinities that deviate strongly from those measured for the wt protein. Both mutants bind PS more strongly than wt PTEN. While C124S PTEN has at least the same affinity to PI(4,5)P(2) and an increased apparent affinity to PI(3,4,5)P(3), due to its lack of catalytic activity, H93R PTEN shows a decreased affinity to PI(4,5)P(2) and no synergy in its binding with PS and PI(4,5)P(2). Neutron reflection measurements show that the PTEN phosphatase "scoots" along the membrane surface (penetration <5 Å) but binds the membrane tightly with its two major domains, the C2 and phosphatase domains, as suggested by the crystal structure. The regulatory C-terminal tail is most likely displaced from the membrane and organized on the far side of the protein, ∼60 Å away from the bilayer surface, in a rather compact structure. The combination of binding studies and neutron reflection allows us to distinguish between PTEN mutant proteins and ultimately may identify the structural features required for membrane binding and activation of PTEN.

Indexed as

Binding SitesCell MembraneHumansMembrane ProteinsMutationNeutronsPhosphatidylinositolsPhosphatidylserinesProtein BindingPTEN PhosphohydrolaseStructure-Activity RelationshipSurface Plasmon ResonanceMembrane ProteinsPhosphatidylinositolsPhosphatidylserinesPTEN PhosphohydrolasePTEN protein, human

Identifiers

PMID22505997
PMCPMC3323581
OpenAlexW2069596797

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.