Evidence map›Paper›PMID 22504645›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2012

Dissecting mechanisms of immunodominance to the common tuberculosis antigens ESAT-6, CFP10, Rv2031c (hspX), Rv2654c (TB7.7), and Rv1038c (EsxJ).

Cecilia S Lindestam Arlehamn, John Sidney, Ryan Henderson, Jason A Greenbaum, Eddie A James, Magdalini Moutaftsi, Rhea Coler, Denise M McKinney, Daniel Park, Randy Taplitz and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed, 1 pooled it
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 1 synthesis or guideline pooled it, 91 citations in OpenAlex.

  1. Pooled it
  2. Immunodominant Tuberculosis Antigens Recognized by Human CD4Cold Spring Harbor perspectives in medicine · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Mitochondrial Transplantation Promotes Protective Effector and Memory CD4Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. TheFrontiers in immunology · 2021
    Article
  14. Article
  15. Diagnostic Accuracy of Early Secretory Antigenic Target-6-Free Interferon-gamma Release Assay Compared to QuantiFERON-TB Gold In-tube.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2019
    Article
  16. Widespread Tau-Specific CD4 T Cell Reactivity in the General Population.Journal of immunology (Baltimore, Md. : 1950) · 2019
    Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Cecilia S Lindestam ArlehamnDivision of Vaccine Discovery, La Jolla Institute for Allergy and Immunology, La Jolla, CA 92037, USA.
John Sidney
Ryan Henderson
Jason A Greenbaum
Eddie A James
Magdalini Moutaftsi
Rhea Coler
Denise M McKinney
Daniel Park
Randy Taplitz
William W Kwok
Howard Grey
Bjoern Peters
Alessandro Sette
La Jolla Institute for Immunology · USInfectious Disease Research Institute · USUniversity of California, San Diego · USBenaroya Research InstituteVirginia Mason Medical Center · US

Funding

NIAID NIH HHS HHSN272200700048CNIAID NIH HHS N01-AI-900044C
6 · The paper itself

Abstract

Diagnosis of tuberculosis often relies on the ex vivo IFN-γ release assays QuantiFERON-TB Gold In-Tube and T-SPOT.TB. However, understanding of the immunological mechanisms underlying their diagnostic use is still incomplete. Accordingly, we investigated T cell responses for the TB Ags included in the these assays and other commonly studied Ags: early secreted antigenic target 6 kDa, culture filtrate protein 10 kDa, Rv2031c, Rv2654c, and Rv1038c. PBMC from latently infected individuals were tested in ex vivo ELISPOT assays with overlapping peptides spanning the entirety of these Ags. We found striking variations in prevalence and magnitude of ex vivo reactivity, with culture filtrate protein 10 kDa being most dominant, followed by early secreted antigenic target 6 kDa and Rv2654c being virtually inactive. Rv2031c and Rv1038c were associated with intermediate patterns of reactivity. Further studies showed that low reactivity was not due to lack of HLA binding peptides, and high reactivity was associated with recognition of a few discrete dominant antigenic regions. Different donors recognized the same core sequence in a given epitope. In some cases, the identified epitopes were restricted by a single specific common HLA molecule (selective restriction), whereas in other cases, promiscuous restriction of the same epitope by multiple HLA molecules was apparent. Definition of the specific restricting HLA allowed to produce tetrameric reagents and showed that epitope-specific T cells recognizing either selectively or promiscuously restricted epitopes were predominantly T effector memory. In conclusion, these results highlight the feasibility of more clearly defined TB diagnostic reagent.

Indexed as

AdultAgedAntigens, BacterialBacterial ProteinsEnzyme-Linked Immunosorbent AssayHistocompatibility Antigens Class IIHLA AntigensHumansImmunodominant EpitopesMiddle AgedPeptide FragmentsProtein BindingT-Lymphocyte SubsetsYoung AdultAntigens, BacterialBacterial ProteinsCFP-10 protein (71-85), Mycobacterium tuberculosisESAT-6 protein, Mycobacterium tuberculosisHistocompatibility Antigens Class IIHLA AntigensHspX protein, Mycobacterium tuberculosisImmunodominant EpitopesPeptide FragmentsRv2654 protein, Mycobacterium tuberculosis

Identifiers

PMID22504645
PMCPMC3345088
OpenAlexW2171036641

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.