Evidence map›Paper›PMID 22504421›Full record

ArticleNature genetics2012

Common variants at 12q14 and 12q24 are associated with hippocampal volume.

Joshua C Bis, Charles DeCarli, Albert Vernon Smith, Fedde van der Lijn, Fabrice Crivello, Myriam Fornage, Stephanie Debette, Joshua M Shulman, Helena Schmidt, Velandai Srikanth and 74 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 141 papers, 15 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
141citing papers in PubMed, 15 pooled it
17.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

141 citing papers in PubMed, 15 syntheses or guidelines pooled it, 243 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Pooled it
  7. Pooled it
  8. Pooled it
  9. Pooled it
  10. Pooled it
  11. Pooled it
  12. Pooled it
  13. Pooled it
  14. Pooled it
  15. Pooled it
  16. Genome-wide scan of healthy human connectome discovers SPON1 gene variant influencing dementia severity.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Trial
  17. Review
  18. Article
  19. Article
  20. Article

81 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

84 authors at 20 institutions in 11 countries.

Joshua C BisCardiovascular Health Research Unit, Department of Medicine, University of Washington, Seattle, Washington, USA.
Charles DeCarli
Albert Vernon Smith
Fedde van der Lijn
Fabrice Crivello
Myriam Fornage
Stephanie Debette
Joshua M Shulman
Helena Schmidt
Velandai Srikanth
Maaike Schuur
Lei Yu
Seung-Hoan Choi
Sigurdur Sigurdsson
Benjamin F J Verhaaren
Anita L DeStefano
Jean-Charles Lambert
Clifford R Jack
Maksim Struchalin
Jim Stankovich
Carla A Ibrahim-Verbaas
Debra Fleischman
Alex Zijdenbos
Tom den Heijer
Bernard Mazoyer
Laura H Coker
Christian Enzinger
Patrick Danoy
Najaf Amin
Konstantinos Arfanakis
Mark A van Buchem
Renée F A G de Bruijn
Alexa Beiser
Carole Dufouil
Juebin Huang
Margherita Cavalieri
Russell Thomson
Wiro J Niessen
Lori B Chibnik
Gauti K Gislason
Albert Hofman
Aleksandra Pikula
Philippe Amouyel
Kevin B Freeman
Thanh G Phan
Ben A Oostra
Jason L Stein
Sarah E Medland
Alejandro Arias Vasquez
Derrek P Hibar
Margaret J Wright
Barbara Franke
Nicholas G Martin
Paul M Thompson
Enhancing Neuro Imaging Genetics through Meta-Analysis Consortium
Michael A Nalls
Andre G Uitterlinden
Rhoda Au
Alexis Elbaz
Richard J Beare
John C van Swieten
Oscar L Lopez
Tamara B Harris
Vincent Chouraki
Monique M B Breteler
Philip L De Jager
James T Becker
Meike W Vernooij
David Knopman
Franz Fazekas
Philip A Wolf
Aad van der Lugt
Vilmundur Gudnason
W T Longstreth
Matthew A Brown
David A Bennett
Cornelia M van Duijn
Thomas H Mosley
Reinhold Schmidt
Christophe Tzourio
Lenore J Launer
M Arfan Ikram
Sudha Seshadri
Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium
Boston University · USErasmus MC · NLBroad Institute · USInserm · FRRush University Medical Center · USMedical University of Graz · ATUniversity of Pittsburgh · USCentre National de la Recherche Scientifique · FRRadboud University Nijmegen · NLLeiden University Medical Center · NLQIMR Berghofer Medical Research Institute · AUUniversity of Tasmania · AUUniversity of Washington · USJackson Memorial Hospital · USMayo Clinic · USUniversité de Bordeaux · FRUniversity of Bonn · DEUniversity of California, Los Angeles · USUniversity of Iceland · ISImaging, Brain, and Neuropsychiatry · FR

Funding

Institute for Clinical and Translational Research (UL1)UL1RR025005 · NCRR · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2007 to 2011
$75.8M
SUPPLEMENT TO RUSH ALZHEIMERS DISEASE CENTER COREP30AG010161 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 1991 to 2020
$49.1M
EPIDEMIOLOGY OF NEURAL RESERVE AND NEUROBIOLOGY IN AGINGR01AG017917 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 2001 to 2023
$43.3M
TREATMENT OF DEPRESSION IN ALZHEIMER'S DISEASEP50AG005133 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BECKER, JAMES T. · 1985 to 2019
$43.0M
Neuropathology CoreP30AG013846 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI KOWALL, NEIL W. · 1996 to 2020
$29.1M
PRECURSORS OF STROKE INCIDENCE AND PROGNOSISR01NS017950 · NINDS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Hugo Javier Aparicio, Jose Rafael Romero · 1985 to 2026
$22.9M
RISK FACTORS, PATHOLOGY, AND CLINICAL EXPRESSIONS OF ADR01AG015819 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 1998 to 2024
$21.4M
Genome-Wide Association Analysis in Essential Hypertension (FEHGAS study)R01HL086694 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ARAVINDA CHAKRAVARTI · 2007 to 2026
$21.2M
EPIDEMIOLOGY OF DEMENTIA IN THE FRAMINGHAM STUDYR01AG008122 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI AU, RHODA, SESHADRI, SUDHA · 1989 to 2015
$14.4M
MRI, Genetics &Cognitive Precursors of AD &DementiaR01AG016495 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI AU, RHODA · 1999 to 2016
$12.5M
Epidemiology of Venous Thrombosis & Pulmonary EmbolismR01HL059367 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI TANG, WEIHONG · 1998 to 2024
$11.8M
CHARGE Consortium: Omics Discovery for CVD and Aging PhenotypesR01HL105756 · NHLBI · UNIVERSITY OF WASHINGTON · PI Bruce M Psaty, NICHOLAS L SMITH · 2011 to 2026
$9.5M
Intramural NIH HHSMedical Research Council G0700704Medical Research Council G0701075Medical Research Council G0901254Medical Research Council G1001245Medical Research Council G1100616Medical Research Council MR/K01417X/1NCRR NIH HHS UL1 RR025005NCRR NIH HHS UL1RR025005NHGRI NIH HHS U01 HG004402NHGRI NIH HHS U01HG004402NHLBI NIH HHS HHSN268201100005CNHLBI NIH HHS HHSN268201100005GNHLBI NIH HHS HHSN268201100005INHLBI NIH HHS HHSN268201100006CNHLBI NIH HHS HHSN268201100007CNHLBI NIH HHS HHSN268201100007INHLBI NIH HHS HHSN268201100008CNHLBI NIH HHS HHSN268201100008INHLBI NIH HHS HHSN268201100009CNHLBI NIH HHS HHSN268201100009INHLBI NIH HHS HHSN268201100010CNHLBI NIH HHS HHSN268201100011CNHLBI NIH HHS HHSN268201100011INHLBI NIH HHS HHSN268201100012CNHLBI NIH HHS HL086694NHLBI NIH HHS HL087641NHLBI NIH HHS HL087652NHLBI NIH HHS HL093029NHLBI NIH HHS HL105756NHLBI NIH HHS HL59367NHLBI NIH HHS HL7825NHLBI NIH HHS N01 HC025195NHLBI NIH HHS N01-HC-25195NHLBI NIH HHS N02-HL-6-4278NHLBI NIH HHS R01 HL059367NHLBI NIH HHS R01 HL086694NHLBI NIH HHS R01 HL087641NHLBI NIH HHS R01 HL087652NHLBI NIH HHS R01 HL093029NHLBI NIH HHS R01 HL105756NHLBI NIH HHS T32 HL007825NIA NIH HHS AG013846NIA NIH HHS AG031287NIA NIH HHS AG033193NIA NIH HHS AG05133NIA NIH HHS AG08122NIA NIH HHS AG15819NIA NIH HHS AG16495NIA NIH HHS AG17917NIA NIH HHS AG20098NIA NIH HHS K08 AG034290NIA NIH HHS N01 AG012100NIA NIH HHS P30 AG010161NIA NIH HHS P30AG10161NIA NIH HHS P50 AG005133NIA NIH HHS R01 AG008122NIA NIH HHS R01 AG015819NIA NIH HHS R01 AG016495NIA NIH HHS R01 AG017917NIA NIH HHS R01 AG020098NIA NIH HHS R01 AG031287NIA NIH HHS R01 AG033193NIA NIH HHS R01 AG040770NIA NIH HHS R56 AG020098NIMH NIH HHS R01 MH078111NINDS NIH HHS NS17950NINDS NIH HHS R01 NS017950PHS HHS HHSN268200625226C
6 · The paper itself

Abstract

Aging is associated with reductions in hippocampal volume that are accelerated by Alzheimer's disease and vascular risk factors. Our genome-wide association study (GWAS) of dementia-free persons (n = 9,232) identified 46 SNPs at four loci with P values of <4.0 × 10(-7). In two additional samples (n = 2,318), associations were replicated at 12q14 within MSRB3-WIF1 (discovery and replication; rs17178006; P = 5.3 × 10(-11)) and at 12q24 near HRK-FBXW8 (rs7294919; P = 2.9 × 10(-11)). Remaining associations included one SNP at 2q24 within DPP4 (rs6741949; P = 2.9 × 10(-7)) and nine SNPs at 9p33 within ASTN2 (rs7852872; P = 1.0 × 10(-7)); along with the chromosome 12 associations, these loci were also associated with hippocampal volume (P < 0.05) in a third younger, more heterogeneous sample (n = 7,794). The SNP in ASTN2 also showed suggestive association with decline in cognition in a largely independent sample (n = 1,563). These associations implicate genes related to apoptosis (HRK), development (WIF1), oxidative stress (MSR3B), ubiquitination (FBXW8) and neuronal migration (ASTN2), as well as enzymes targeted by new diabetes medications (DPP4), indicating new genetic influences on hippocampal size and possibly the risk of cognitive decline and dementia.

Indexed as

Alzheimer DiseaseChromosomes, Human, Pair 12Cognition DisordersDementiaGenetic LociGenetic MarkersGenome-Wide Association StudyHippocampusHumansMeta-Analysis as TopicPolymorphism, Single NucleotideGenetic Markers

Identifiers

PMID22504421
PMCPMC3427729
OpenAlexW2126824241

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.