Evidence map›Paper›PMID 22502592›Full record

ArticleThe Biochemical journal2012

Definition of the binding mode of a new class of phosphoinositide 3-kinase α-selective inhibitors using in vitro mutagenesis of non-conserved amino acids and kinetic analysis.

Zhaohua Zheng, Syazwani I Amran, Jiuxiang Zhu, Oleg Schmidt-Kittler, Kenneth W Kinzler, Bert Vogelstein, Peter R Shepherd, Philip E Thompson, Ian G Jennings

Open access · greenAbstract readComparative Study
In one paragraph

Article in The Biochemical journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 27 citations in OpenAlex.

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  9. Eradication of metastatic mouse cancers resistant to immune checkpoint blockade by suppression of myeloid-derived cells.Proceedings of the National Academy of Sciences of the United States of America · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Zhaohua ZhengMedicinal Chemistry, Monash Institute of Pharmaceutical Sciences, Parkville, Victoria 3052, Australia.
Syazwani I Amran
Jiuxiang Zhu
Oleg Schmidt-Kittler
Kenneth W Kinzler
Bert Vogelstein
Peter R Shepherd
Philip E Thompson
Ian G Jennings
Maurice Wilkins Centre · NZ

Funding

MOLECULAR GENETIC ANALYSIS OF COLORECTAL CANCERR37CA043460 · NCI · JOHNS HOPKINS UNIVERSITY · PI VOGELSTEIN, BERT · 1997 to 2016
$7.4M
GENES FROM THE FAP LOCUSR01CA057345 · NCI · JOHNS HOPKINS UNIVERSITY · PI KINZLER, KENNETH W. · 1992 to 2001
$734k
NCI NIH HHS R01 CA057345NCI NIH HHS R37 CA043460
6 · The paper itself

Abstract

The binding mechanism of a new class of lipid-competitive, ATP non-competitive, p110α isoform-selective PI3K (phosphoinositide 3-kinase) inhibitors has been elucidated. Using the novel technique of isoform reciprocal mutagenesis of non-conserved amino acids in the p110α and p110β isoforms, we have identified three unique binding mechanisms for the p110α-selective inhibitors PIK-75, A-66S and J-32. Each of the inhibitor's p110α-isoform-selective binding was found to be due to interactions with different amino acids within p110. The PIK-75 interaction bound the non-conserved region 2 amino acid p110α Ser(773), A-66S bound the region 1 non-conserved amino acid p110α Gln(859), and J-32 binding had an indirect interaction with Lys(776) and Ile(771). The isoform reciprocal mutagenesis technique is shown to be an important analytical tool for the rational design of isoform-selective inhibitors.

Indexed as

Mutagenesis, Site-DirectedPhosphoinositide-3 Kinase InhibitorsAmino AcidsClass II Phosphatidylinositol 3-KinasesClass I Phosphatidylinositol 3-KinasesConserved SequenceDose-Response Relationship, DrugHydrazonesIsoenzymesKineticsPhosphatidylinositol 3-KinasesProlineProtein BindingSulfonamidesThiazolesAmino AcidsClass II Phosphatidylinositol 3-KinasesClass I Phosphatidylinositol 3-KinasesHydrazonesIsoenzymesN1-(2-(t-butyl)-4'-methyl-(4,5'-bithiazol)- 2'-yl)pyrrolidine-1,2-dicarboxamidep110delta protein, ratPhosphatidylinositol 3-KinasesPhosphoinositide-3 Kinase InhibitorsPIK 75ProlineSulfonamidesThiazoles

Identifiers

PMID22502592
PMCPMC3474370
OpenAlexW2138591309

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.