Evidence map›Paper›PMID 22500028›Full record

ArticleThe Journal of biological chemistry2012

Unraveling unique structure and biosynthesis pathway of N-linked glycans in human fungal pathogen Cryptococcus neoformans by glycomics analysis.

Jeong-Nam Park, Dong-Jik Lee, Ohsuk Kwon, Doo-Byoung Oh, Yong-Sun Bahn, Hyun Ah Kang

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 51 citations in OpenAlex.

  1. Molecular Architecture ofbioRxiv : the preprint server for biology · 2026
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  4. Evolutionary uniqueeLife · 2025
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  6. Extension ofmBio · 2022
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  10. Ultrastructural Study ofFrontiers in microbiology · 2021
    Article
  11. Review
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  13. CoremBio · 2020
    Article
  14. Article
  15. Composition and biosynthetic machinery of theCell surface (Amsterdam, Netherlands) · 2019
    Article
  16. Review
  17. Titan cell production inCell surface (Amsterdam, Netherlands) · 2018
    Article
  18. Article
  19. Article
  20. Structural analysis of N-/O-glycans assembled on proteins in yeasts.Journal of microbiology (Seoul, Korea) · 2018
    Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jeong-Nam ParkDepartment of Life Science, Center for Fungal Pathogenesis, Chung-Ang University, Seoul 156-756, South Korea.
Dong-Jik Lee
Ohsuk Kwon
Doo-Byoung Oh
Yong-Sun Bahn
Hyun Ah Kang
Chung-Ang University · KRKorea Research Institute of Bioscience and Biotechnology · KRYonsei University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The encapsulated fungal pathogen Cryptococcus neoformans causes cryptococcosis in immunocompromised individuals. Although cell surface mannoproteins have been implicated in C. neoformans pathogenicity, the structure of N-linked glycans assembled on mannoproteins has not yet been elucidated. By analyzing oligosaccharide profiles combined with exoglycosidase treatment, we report here that C. neoformans has serotype-specific high mannose-type N-glycans with or without a β1,2-xylose residue, which is attached to the trimannosyl core of N-glycans. Interestingly, the neutral N-glycans of serotypes A and D were shown to contain a xylose residue, whereas those of serotype B appeared to be much shorter and devoid of a xylose residue. Moreover, analysis of the C. neoformans uxs1Δ mutant demonstrated that UDP-xylose is utilized as a donor sugar in N-glycan biosynthesis. We also constructed and analyzed a set of C. neoformans mutant strains lacking genes putatively assigned to the reconstructed N-glycan biosynthesis pathway. It was shown that the outer chain of N-glycan is initiated by CnOch1p with addition of an α1,6-mannose residue and then subsequently extended by CnMnn2p with multiple additions of α1,2-mannose residues. Finally, comparative analysis of acidic N-glycans from wild-type, Cnoch1Δ, Cnmnn2Δ, and Cnuxs1Δ strains strongly indicated the presence of xylose phosphate attached to mannose residues in the core and outer region of N-glycans. Our data present the first report on the unique structure and biosynthesis pathway of N-glycans in C. neoformans.

Indexed as

Carbohydrate ConformationCarbohydrate MetabolismCryptococcosisCryptococcus neoformansGlycomicsHumansMutationPolysaccharidesXylosePolysaccharidesXylose

Identifiers

PMID22500028
PMCPMC3365987
OpenAlexW2137481516

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.