Evidence map›Paper›PMID 22500018›Full record

ArticleThe Journal of biological chemistry2012

Membrane potential regulates nicotinic acid adenine dinucleotide phosphate (NAADP) dependence of the pH- and Ca2+-sensitive organellar two-pore channel TPC1.

Volodymyr Rybalchenko, Malini Ahuja, Jessica Coblentz, Dev Churamani, Sandip Patel, Krill Kiselyov, Shmuel Muallem

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
8.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 75 citations in OpenAlex.

  1. The protein interaction networks of mucolipins and two-pore channels.Biochimica et biophysica acta. Molecular cell research · 2019
    Pooled it
  2. NAADP-Dependent TPC Current.Handbook of experimental pharmacology · 2023
    Article
  3. Structure and Function of Plant and Mammalian TPC Channels.Handbook of experimental pharmacology · 2023
    Article
  4. Two-pore channels: going with the flows.Biochemical Society transactions · 2022
    Article
  5. Review
  6. Review
  7. Review
  8. NAADP-binding proteins find their identity.Trends in biochemical sciences · 2022
    Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Endolysosomal CaCancers · 2018
    Review
  14. mTORC1 controls lysosomal CaScience signaling · 2018
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Volodymyr RybalchenkoEpithelial Signaling and Transport Section, Molecular Physiology and Therapeutics Branch, NIDCR, National Institutes of Health, Bethesda, Maryland 20892, USA.
Malini Ahuja
Jessica Coblentz
Dev Churamani
Sandip Patel
Krill Kiselyov
Shmuel Muallem
National Institute of Dental and Craniofacial Research · USUniversity College London · GBUniversity of Pittsburgh · US

Funding

Ca2+ signaling and HCO3- secretion by exocrine glandsZIADE000735 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI MUALLEM, SHMUEL · 2010 to 2025
$43.1M
The TRPML1 Role in LysosomesR01HD058577 · NICHD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KISELYOV, KIRILL · 2009 to 2013
$1.3M
Biotechnology and Biological Sciences Research Council BB/G013721/1Intramural NIH HHS ZIA DE000735NICHD NIH HHS HD058577NICHD NIH HHS R01 HD058577NIEHS NIH HHS ES01678
6 · The paper itself

Abstract

Nicotinic acid adenine dinucleotide phosphate (NAADP) is a potent second messenger that mobilizes Ca(2+) from the acidic endolysosomes by activation of the two-pore channels TPC1 and TPC2. The channel properties of human TPC1 have not been studied before, and its cellular function is not known. In the present study, we characterized TPC1 incorporated into lipid bilayers. The native and recombinant TPC1 channels are activated by NAADP. TPC1 activity requires acidic luminal pH and high luminal Ca(2+). With Ba(2+) as the permeable ion, luminal Ca(2+) activates TPC1 with an apparent K(m) of 180 μm. TPC1 operates in two tightly coupled conductance states of 47 ± 8 and 200 ± 9 picosiemens. Importantly, opening of the large conductance markedly increases the small conductance mean open time. Changes in membrane potential from 0 to -60 mV increased linearly both the small and the large conductances and NP(o), indicating that TPC1 is regulated by voltage. Intriguingly, the apparent affinity for activation of TPC1 by its ligand NAADP is not constant. Rather, hyperpolarization increases the apparent affinity of TPC1 for NAADP by 10 nm/mV. The concerted regulation of TPC1 activity by luminal Ca(2+) and by membrane potential thus provides a potential mechanism to explain NAADP-induced Ca(2+) oscillations. These findings reveal unique properties of TPC1 to explain its role in Ca(2+) oscillations and cell function.

Indexed as

Biological ClocksCalciumCalcium ChannelsHEK293 CellsHumansHydrogen-Ion ConcentrationLipid BilayersMembrane PotentialsNADPTwo-Pore ChannelsCalciumCalcium ChannelsLipid BilayersNAADPNADPTPCN1 protein, humanTPCN2 protein, humanTwo-Pore Channels

Identifiers

PMID22500018
PMCPMC3370221
OpenAlexW2005302551

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.