Evidence map›Paper›PMID 22499412›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2012

A Gal4/UAS system for conditional transgene expression in rhombomere 4 of the zebrafish hindbrain.

Seong-Kyu Choe, Mako Nakamura, Franck Ladam, Letitiah Etheridge, Charles G Sagerström

Open access · bronzeAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. A GAL4-inducible transgenic tool kit for the in vivo modulation of Rho GTPase activity in zebrafish.Developmental dynamics : an official publication of the American Association of Anatomists · 2016
    Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Seong-Kyu ChoeDepartment of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, Massachusetts 01605, USA.
Mako Nakamura
Franck Ladam
Letitiah Etheridge
Charles G Sagerström
University of Massachusetts Chan Medical School · US

Funding

MOLECULAR ANALYSIS OF HINDBRAIN FORMATIONR01NS038183 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Charles G Sagerstrom · 1999 to 2026
$8.3M
Genetic Regulation of Rhombomere FormationR01HD065081 · NICHD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI SAGERSTROM, CHARLES G · 2011 to 2015
$1.7M
Molecular Analysis of Hindbrain FormationR56NS038183 · NINDS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI SAGERSTROM, CHARLES G · 2007 to 2007
$400k
NICHD NIH HHS HD065081NICHD NIH HHS R01 HD065081NINDS NIH HHS NS038183NINDS NIH HHS R01 NS038183NINDS NIH HHS R56 NS038183
6 · The paper itself

Abstract

backgroundThe zebrafish is well established as a model organism for the study of vertebrate embryogenesis, but transgenic lines enabling restricted gene expression are still lacking for many tissues.

resultsWe first generated the hoxb1a(β-globin):eGFP(um8) line that expresses eGFP in hindbrain rhombomere 4 (r4), as well as in facial motor neurons migrating caudally from r4. Second, we generated the hoxb1a(β-globin) Gal4VP16(um60) line to express the exogenous Gal4VP16 transcription factor in r4. Lastly, we prepared the UAS(β-actin):hoxa3a(um61) line where the hoxa3a gene, which is normally expressed in r5 and r6, is under control of Gal4-regulated UAS elements. Crossing the hoxb1a(β-globin):Gal4VP16(um60) line to the UAS(β-actin):hoxa3a(um61) line drives robust hoxa3a expression in r4. We find that transgenic expression of hoxa3a in r4 does not affect hoxb1a expression, but has variable effects on migration of facial motorneurons and formation of Mauthner neurons. While cases of somatic transgene silencing have been reported in zebrafish, we have not observed such silencing to date, possibly because of our efforts to minimize repetitive sequences in the transgenic constructs.

conclusionWe have generated three transgenic lines that will be useful for future studies by permitting the labeling of r4-derived cells, as well as by enabling r4-specific expression of various transgenes.

Indexed as

ActinsAnimalsAnimals, Genetically ModifiedCrosses, GeneticDNA PrimersGene Expression Regulation, DevelopmentalGreen Fluorescent ProteinsImmunohistochemistryIn Situ HybridizationMicroinjectionsOligonucleotidesRhombencephalonTrans-ActivatorsTransgenesZebrafishActinsDNA Primersenhanced green fluorescent proteinGal-VP16Green Fluorescent ProteinsOligonucleotidesTrans-Activators

Identifiers

PMID22499412
PMCPMC3422023
OpenAlexW1998699546

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.