Evidence map›Paper›PMID 22497344›Full record

ArticleBiochemistry2012

Binding affects the tertiary and quaternary structures of the Shigella translocator protein IpaB and its chaperone IpgC.

Philip R Adam, Mrinalini K Patil, Nicholas E Dickenson, Shyamal Choudhari, Michael Barta, Brian V Geisbrecht, Wendy L Picking, William D Picking

Abstract read
In one paragraph

Article in Biochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Review
  2. Development of a NovelVaccines · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. TheMicroorganisms · 2021
    Review
  8. Structural Insights ofFrontiers in cellular and infection microbiology · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. The Many Faces of IpaB.Frontiers in cellular and infection microbiology · 2016
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Studies of the conformational stability of invasion plasmid antigen B from Shigella.Protein science : a publication of the Protein Society · 2013
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Philip R AdamDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK 74078, USA.
Mrinalini K Patil
Nicholas E Dickenson
Shyamal Choudhari
Michael Barta
Brian V Geisbrecht
Wendy L Picking
William D Picking

Funding

Control of Type III secretion in Shigella by lpaDR01AI067858 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI PICKING, WENDY L. · 2007 to 2011
$1.9M
A Mechanism for Shigella Type III Secretion ActivationR21AI090149 · NIAID · OKLAHOMA STATE UNIVERSITY STILLWATER · PI PICKING, WILLIAM D. · 2010 to 2011
$407k
NIAID NIH HHS R01 AI067858NIAID NIH HHS R21 AI090149
6 · The paper itself

Abstract

Shigella flexneri uses its type III secretion system (T3SS) to promote invasion of human intestinal epithelial cells as the first step in causing shigellosis, a life-threatening form of dysentery. The Shigella type III secretion apparatus (T3SA) consists of a basal body that spans the bacterial envelope and an exposed needle that injects effector proteins into target cells. The nascent Shigella T3SA needle is topped with a pentamer of the needle tip protein invasion plasmid antigen D (IpaD). Bile salts trigger recruitment of the first hydrophobic translocator protein, IpaB, to the tip complex where it senses contact with a host membrane. In the bacterial cytoplasm, IpaB exists in a complex with its chaperone IpgC. Several structures of IpgC have been determined, and we recently reported the 2.1 Å crystal structure of the N-terminal domain (IpaB(74.224)) of IpaB. Like IpgC, the IpaB N-terminal domain exists as a homodimer in solution. We now report that when the two are mixed, these homodimers dissociate and form heterodimers having a nanomolar dissociation constant. This is consistent with the equivalent complexes copurified after they had been co-expressed in Escherichia coli. Fluorescence data presented here also indicate that the N-terminal domain of IpaB possesses two regions that appear to contribute additively to chaperone binding. It is also likely that the N-terminus of IpaB adopts an alternative conformation as a result of chaperone binding. The importance of these findings within the functional context of these proteins is discussed.

Indexed as

Bacterial ProteinsCalorimetryCircular DichroismFluorescence PolarizationFluorescence Resonance Energy TransferMolecular ChaperonesPeptide FragmentsProtein BindingProtein MultimerizationProtein Structure, QuaternaryProtein Structure, SecondaryProtein Structure, TertiaryBacterial ProteinsipaB protein, ShigellaIpgC protein, ShigellaMolecular ChaperonesPeptide Fragments

Identifiers

PMID22497344
PMCPMC3903306

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.