Evidence map›Paper›PMID 22493498›Full record

ArticleThe Journal of biological chemistry2012

Metabolic flux of extracellular heme uptake in Pseudomonas aeruginosa is driven by the iron-regulated heme oxygenase (HemO).

Kylie D Barker, Katalin Barkovits, Angela Wilks

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Protein-chromophore interactions controlling photoisomerization in red/green cyanobacteriochromes.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Structure of aBiochemistry · 2019
    Article
  11. Article
  12. The Asp99-Arg188 salt bridge of the Pseudomonas aeruginosa HemO is critical in allowing conformational flexibility during catalysis.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Article
  13. The Journal of biological chemistry · 2018
    Article
  14. Article
  15. Article
  16. Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kylie D BarkerDepartment of Pharmaceutical Sciences, School of Pharmacy, University of Maryland, Baltimore, Maryland 21201-1140, USA.
Katalin Barkovits
Angela Wilks
University of Maryland, Baltimore · US

Funding

Structure-Function of the Shigella dysenteriae heme uptake operon (shu)R01AI085535 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI WILKS, ANGELA · 2009 to 2012
$1.5M
Heme Oxygenase: Structure, Function and PathogenesisR01AI055912 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI WILKS, ANGELA · 2004 to 2008
$1.3M
Heme Oxygenase: Structure, function and pathogenesisR56AI055912 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI WILKS, ANGELA · 2009 to 2010
$600k
NIAID NIH HHS AI-55912NIAID NIH HHS AI-85535NIAID NIH HHS R01 AI055912NIAID NIH HHS R01 AI085535NIAID NIH HHS R56 AI055912
6 · The paper itself

Abstract

Heme utilization by Pseudomonas aeruginosa involves several proteins required for internalization and degradation of heme. In the following report we provide the first direct in vivo evidence for the specific degradation of extracellular heme to biliverdin (BV) by the iron-regulated HemO. Moreover, through isotopic labeling ((13)C-heme) and electrospray ionization-MS analysis we have confirmed the regioselectivity and ratio of (13)C-δ and β-BV IX (70:30) is identical in vivo to that previously observed for the purified protein. Furthermore, the (13)C-BV IXδ and BV IXβ products are effluxed from the cell by an as yet unidentified transporter. Conversion of extracellular heme to BV is dependent solely on the iron-regulated HemO as evidenced by the lack of BV production in the P. aeruginosa hemO deletion strain. Complementation of P. aeruginosa ΔhemO with a plasmid expressing either the wild type HemO or α-regioselective HemO mutant restored extracellular heme uptake and degradation. In contrast deletion of the gene encoding the cytoplasmic heme-binding protein, PhuS, homologs of which have been proposed to be heme oxygenases, did not eliminate (13)C-BV IXδ and IXβ production. In conclusion the metabolic flux of extracellular heme as a source of iron is driven by the catalytic action of HemO.

Indexed as

Blotting, WesternChromatography, High Pressure LiquidElectrophoresis, Polyacrylamide GelGenetic Complementation TestHemeHeme Oxygenase (Decyclizing)IronPseudomonas aeruginosaSpectrometry, Mass, Electrospray IonizationHemeHeme Oxygenase (Decyclizing)Iron

Identifiers

PMID22493498
PMCPMC3365768
OpenAlexW2164310962

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.