Evidence map›Paper›PMID 22493065›Full record

ArticleMolecular and cellular biology2012

Histone demethylase UTX and chromatin remodeler BRM bind directly to CBP and modulate acetylation of histone H3 lysine 27.

Feng Tie, Rakhee Banerjee, Patricia A Conrad, Peter C Scacheri, Peter J Harte

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 149 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Histone Demethylase UTX Suppresses Tumor Cell Proliferation by Regulating Stress Granules.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  5. Article
  6. Overexpression ofBioMed research international · 2025
    Article
  7. Review
  8. Article
  9. Schlank orchestrates insect developmental transition by switching H3K27 acetylation to trimethylation in the prothoracic gland.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Review
  11. Review
  12. Article
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  14. Article
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  18. Article
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22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Feng TieDepartment of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, Ohio, USA.
Rakhee Banerjee
Patricia A Conrad
Peter C Scacheri
Peter J Harte
Case Western Reserve University · US

Funding

Drosophila Transgenic RNAi Resource ProjectR01GM084947 · NIGMS · HARVARD MEDICAL SCHOOL · PI PERRIMON, NORBERT · 2008 to 2019
$9.8M
MOLECULAR BASIS OF HOMEOTIC GENE REGULATIONR01GM039255 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HARTE, PETER J. · 1988 to 2020
$7.1M
Genomic studies of CHD7 in CHARGE syndromeR01HD056369 · NICHD · CASE WESTERN RESERVE UNIVERSITY · PI SCACHERI, PETER CHRISTOPHER · 2007 to 2011
$1.7M
Development of a universal tagging method for genome wide ChIP analysesR01HG004722 · NHGRI · CASE WESTERN RESERVE UNIVERSITY · PI SCACHERI, PETER CHRISTOPHER, WANG, ZHENGHE · 2008 to 2010
$1.4M
LEICA AOBS CONFOCAL FOR USE IN MULTI-USER FACILITY: REPRODUCTIVE BIOLOGYS10RR017980 · NCRR · CASE WESTERN RESERVE UNIVERSITY · PI CONRAD, PATRICIA A · 2004 to 2004
$492k
CYTO VISION WORKSTATION FOR USE IN MULTI-USER FACILITY: CYSTIC FIBROSISS10RR021228 · NCRR · CASE WESTERN RESERVE UNIVERSITY · PI CONRAD, PATRICIA A · 2005 to 2005
$178k
Typhoon Trio Variable Mode Imager For Use In Multi-User FacilityS10RR024536 · NCRR · CASE WESTERN RESERVE UNIVERSITY · PI CONRAD, PATRICIA A · 2008 to 2008
$123k
NCRR NIH HHS RR-017980-01NCRR NIH HHS RR-021228-01NCRR NIH HHS RR-024536-01NCRR NIH HHS S10 RR017980NCRR NIH HHS S10 RR021228NCRR NIH HHS S10 RR024536NHGRI NIH HHS R01 HG004722NHGRI NIH HHS R01HG004722NICHD NIH HHS R01 HD056369NICHD NIH HHS R01HD056369NIGMS NIH HHS R01 GM039255NIGMS NIH HHS R01 GM084947NIGMS NIH HHS R01GM084947NIGMS NIH HHS R01GM39255
6 · The paper itself

Abstract

Trithorax group (TrxG) proteins antagonize Polycomb silencing and are required for maintenance of transcriptionally active states. We previously showed that the Drosophila melanogaster acetyltransferase CREB-binding protein (CBP) acetylates histone H3 lysine 27 (H3K27ac), thereby directly blocking its trimethylation (H3K27me3) by Polycomb repressive complex 2 (PRC2) in Polycomb target genes. Here, we show that H3K27ac levels also depend on other TrxG proteins, including the histone H3K27-specific demethylase UTX and the chromatin-remodeling ATPase Brahma (BRM). We show that UTX and BRM are physically associated with CBP in vivo and that UTX, BRM, and CBP colocalize genome-wide on Polycomb response elements (PREs) and on many active Polycomb target genes marked by H3K27ac. UTX and BRM bind directly to conserved zinc fingers of CBP, suggesting that their individual activities are functionally coupled in vivo. The bromodomain-containing C terminus of BRM binds to the CBP PHD finger, enhances PHD binding to histone H3, and enhances in vitro acetylation of H3K27 by recombinant CBP. brm mutations and knockdown of UTX by RNA interference (RNAi) reduce H3K27ac levels and increase H3K27me3 levels. We propose that direct binding of UTX and BRM to CBP and their modulation of H3K27ac play an important role in antagonizing Polycomb silencing.

Indexed as

Chromatin Assembly and DisassemblyAcetylationAnimalsBinding SitesCell Cycle ProteinsChromatinCREB-Binding ProteinDrosophila melanogasterDrosophila ProteinsHistonesLysineOxidoreductases, N-DemethylatingPolycomb Repressive Complex 2Protein BindingTrans-Activatorsbrm protein, DrosophilaCell Cycle ProteinsChromatinCREB-Binding ProteinDrosophila ProteinsHistonesLysineOxidoreductases, N-DemethylatingPolycomb Repressive Complex 2Trans-ActivatorsUTX protein, Drosophila

Identifiers

PMID22493065
PMCPMC3372260
OpenAlexW2154138399

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.