Evidence map›Paper›PMID 22492993›Full record

ArticleHuman molecular genetics2012

C-reactive protein (CRP) promoter polymorphisms influence circulating CRP levels in a genome-wide association study of African Americans.

Ayo P Doumatey, Guanjie Chen, Fasil Tekola Ayele, Jie Zhou, Michael Erdos, Daniel Shriner, Hanxia Huang, Jokotade Adeleye, Williams Balogun, Olufemi Fasanmade and 12 more

Open access · greenAbstract read
In one paragraph

Article in Human molecular genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 2 pooled it
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 2 syntheses or guidelines pooled it, 41 citations in OpenAlex.

  1. Pooled it
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  12. Therapeutic Lowering of C-Reactive Protein.Frontiers in immunology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 10 institutions in 4 countries.

Ayo P DoumateyCenter for Research on Genomics and Global Health, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA. doumateya@mail.nih.gov
Guanjie Chen
Fasil Tekola Ayele
Jie Zhou
Michael Erdos
Daniel Shriner
Hanxia Huang
Jokotade Adeleye
Williams Balogun
Olufemi Fasanmade
Thomas Johnson
Johnnie Oli
Godfrey Okafor
Albert Amoah
Benjamin A Eghan
Kofi Agyenim-Boateng
Joseph Acheampong
Clement Adebamowo
Norman P Gerry
Michael F Christman
Adebowale Adeyemo
Charles N Rotimi
Genomics (United Kingdom) · GBCenter for Global Health · USKwame Nkrumah University of Science and Technology · GHCoriell Institute For Medical Research · USUniversity of Ibadan · NGUniversity of Lagos · NGUniversity of Nigeria Teaching Hospital · NGNational Human Genome Research Institute · USUniversity of Ghana · GHUniversity of Maryland, Baltimore · US

Funding

Genetic epidemiology of complex diseasesZIAHG200362 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI ROTIMI, CHARLES · 2009 to 2025
$54.7M
UVDM01RR010284 · NCRR · HOWARD UNIVERSITY · PI TAYLOR, WILLIAM ROBERT · 1996 to 2010
$17.4M
The Howard University SCORE Program Supplemental GrantS06GM008016 · NIGMS · HOWARD UNIVERSITY · PI NELSON, KAREN ELIZABETH · 1989 to 2009
$16.1M
Understanding Obesity In Relation to the Built EnvironmentP20MD006899 · NIMHD · JACKSON STATE UNIVERSITY · PI ANTOINE-LAVIGNE, DONNA A · 2012 to 2016
$5.3M
Genetic epidemiology of complex diseasesZ01HG200362 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI ROTIMI, CHARLES · 2008 to 2008
$1.7M
Training Program in Nigeria for NCD Research (TRAPING - NCD)D43TW009106 · FIC · UNIVERSITY OF MARYLAND BALTIMORE · PI ADEBAMOWO, CLEMENT ADEBAYO · 2011 to 2015
$1.1M
FIC NIH HHS D43 TW009106Intramural NIH HHS Z01 HG200362NCRR NIH HHS 2M01RR010284NCRR NIH HHS M01 RR010284NHGRI NIH HHS Z01HG200362NIGMS NIH HHS S06GM008016-320107NIGMS NIH HHS S06GM008016-380111NIMHD NIH HHS P20 MD006899
6 · The paper itself

Abstract

C-reactive protein (CRP) is an acute phase reactant protein produced primarily by the liver. Circulating CRP levels are influenced by genetic and non-genetic factors, including infection and obesity. Genome-wide association studies (GWAS) provide an unbiased approach towards identifying loci influencing CRP levels. None of the six GWAS for CRP levels has been conducted in an African ancestry population. The present study aims to: (i) identify genetic variants that influence serum CRP in African Americans (AA) using a genome-wide association approach and replicate these findings in West Africans (WA), (ii) assess transferability of major signals for CRP reported in European ancestry populations (EA) to AA and (iii) use the weak linkage disequilibrium (LD) structure characteristic of African ancestry populations to fine-map the previously reported CRP locus. The discovery cohort comprised 837 unrelated AA, with the replication of significant single-nucleotide polymorphisms (SNPs) assessed in 486 WA. The association analysis was conducted with 2 366 856 genotyped and imputed SNPs under an additive genetic model with adjustment for appropriate covariates. Genome-wide and replication significances were set at P < 5 × 10(-8) and P < 0.05, respectively. Ten SNPs in (CRP pseudogene-1) CRPP1 and CRP genes were associated with serum CRP (P = 2.4 × 10(-09) to 4.3 × 10(-11)). All but one of the top-scoring SNPs associated with CRP in AA were successfully replicated in WA. CRP signals previously identified in EA samples were transferable to AAs, and we were able to fine-map this signal, reducing the region of interest from the 25 kb of LD around the locus in the HapMap CEU sample to only 8 kb in our AA sample.

Indexed as

Polymorphism, Single NucleotidePromoter Regions, GeneticBlack or African AmericanC-Reactive ProteinFemaleGenome-Wide Association StudyGenotypeHapMap ProjectHumansLinkage DisequilibriumMaleMiddle AgedWhite PeopleC-Reactive Protein

Identifiers

PMID22492993
PMCPMC3373247
OpenAlexW2108456593

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.