Evidence map›Paper›PMID 22492977›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

The costimulatory immunogen LPS induces the B-Cell clones that infiltrate transplanted human kidneys.

Rajesh K Grover, Julong Cheng, Yingjie Peng, Teresa M Jones, Diana I Ruiz, Richard J Ulevitch, John I Glass, Edward A Dennis, Daniel R Salomon, Richard A Lerner

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Urine microbiome in individuals with an impaired immune system.Frontiers in cellular and infection microbiology · 2023
    Review
  3. Review
  4. Article
  5. Microbiota, renal disease and renal transplantation.World journal of transplantation · 2021
    Review
  6. Article
  7. Outstanding questions in transplantation: B cells, alloantibodies, and humoral rejection.American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2019
    Review
  8. Article
  9. Article
  10. Article
  11. Changes in Urinary Microbiome Populations Correlate in Kidney Transplants With Interstitial Fibrosis and Tubular Atrophy Documented in Early Surveillance Biopsies.American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2017
    Article
  12. Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Rajesh K GroverDepartments of Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Julong Cheng
Yingjie Peng
Teresa M Jones
Diana I Ruiz
Richard J Ulevitch
John I Glass
Edward A Dennis
Daniel R Salomon
Richard A Lerner
Scripps Research Institute · USJ. Craig Venter Institute · USUniversity of California, San Diego · US

Funding

Quantitative Biology CoreU19AI063603 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI YATES III, JOHN R · 2004 to 2015
$26.4M
Proteogenomics for Organ Transplantation: Prediction, Diagnosis, InterventionU01AI084146 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI ABECASSIS, MICHAEL M · 2009 to 2013
$10.5M
NIAID NIH HHS U01 AI084146NIAID NIH HHS U01 AI084146-02NIAID NIH HHS U19 AI063603PHS HHS U19 A1063603-08
6 · The paper itself

Abstract

The mechanism of chronic rejection of transplanted human kidneys is unknown. An understanding of this process is important because, chronic rejection ultimately leads to loss of the kidney allograft in most transplants. One feature of chronic rejection is the infiltration of ectopic B-cell clusters that are clonal into the transplanted kidney. We now show that the antibodies produced by these B-cells react strongly with the core carbohydrate region of LPS. Since LPS is a costimulatory immunogen that can react with both the B-cell receptor (BCR) and the Toll-like receptor 4 (TLR4), these results suggest a mechanism for the selective pressure that leads to clonality of these B-cell clusters and opens the possibility that infection and the attendant exposure to LPS plays a role in the chronic rejection of human kidney transplants. If confirmed by clinical studies, these results suggest that treating patients with signs of chronic rejection with antibiotics may improve kidney allograft survival.

Indexed as

Antibody SpecificityBlotting, WesternB-LymphocytesChronic DiseaseClone CellsEnzyme-Linked Immunosorbent AssayGraft RejectionHEK293 CellsHumansKidneyKidney TransplantationLipopolysaccharidesReceptors, Antigen, B-CellSingle-Chain AntibodiesToll-Like Receptor 4Transplantation, HomologousLipopolysaccharidesReceptors, Antigen, B-CellSingle-Chain AntibodiesTLR4 protein, humanToll-Like Receptor 4

Identifiers

PMID22492977
PMCPMC3341022
OpenAlexW2069767584

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.