Evidence map›Paper›PMID 22492355›Full record

ArticleDevelopment (Cambridge, England)2012

COUP-TFII controls amygdala patterning by regulating neuropilin expression.

Ke Tang, John L R Rubenstein, Sophia Y Tsai, Ming-Jer Tsai

Open access · greenAbstract read
In one paragraph

Article in Development (Cambridge, England), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 80 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

Ke TangDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX 77030, USA. ktang_sc@yahoo.com
John L R Rubenstein
Sophia Y Tsai
Ming-Jer Tsai
Baylor College of Medicine · US

Funding

ProteomicsU19DK062434 · NIDDK · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI EVANS, RONALD M · 2002 to 2011
$37.4M
TISSUE COACTIVATOR AND RECEPTOR EXPRESSION FINGERPRINTSP01DK059820 · NIDDK · INSTITUT DE GENETIQUE ET BIOLOGIE MOLECU · PI O'MALLEY, BERT W · 2001 to 2016
$23.1M
Genetic Studies of Cortex Structure and DevelopmentR01NS099099 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI RUBENSTEIN, JOHN L. R. · 2016 to 2025
$6.4M
Diabetes Endocrinology Research CenterP30DK079638 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI CHAN, LAWRENCE · 2008 to 2012
$6.4M
GENETIC STUDIES OF CORTEX STRUCTURE AND DEVELOPMENTR01NS034661 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI RUBENSTEIN, JOHN L. R. · 1996 to 2015
$4.6M
MECHANISM OF ACTION OF COUP TRANSCRIPTION FACTORSR37DK045641 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI TSAI, MING-JER · 1999 to 2008
$3.4M
A Nuclear Receptor COUP-TFII in Vascular Function: Angiogenesis and TumoirgenesisR01HL076448 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI TSAI, SOPHIA Y. · 2005 to 2012
$3.0M
MECHANISMS OF ACTION OF COUP TRANSCRIPTION FACTORSR01DK045641 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI TSAI, MING-JER · 1992 to 2014
$2.2M
IN VITRO EXPRESSION OF HORMONE REGULATED GENES: INSULINR01HD017379 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI TSAI, MING-JER · 1985 to 2011
$2.1M
IN VITRO EXPRESSION OF HORMONE-REGULATED GENESR37HD017379 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI TSAI, MING-JER · 1995 to 2004
$1.6M
NHLBI NIH HHS HL76448NHLBI NIH HHS R01 HL076448NICHD NIH HHS HD17379NICHD NIH HHS R01 HD017379NICHD NIH HHS R37 HD017379NIDDK NIH HHS DK079638NIDDK NIH HHS DK45641NIDDK NIH HHS DK59820NIDDK NIH HHS DK62434NIDDK NIH HHS P01 DK059820NIDDK NIH HHS P30 DK079638NIDDK NIH HHS R01 DK045641NIDDK NIH HHS R37 DK045641NIDDK NIH HHS U19 DK062434NINDS NIH HHS R01 NS034661NINDS NIH HHS R01 NS099099
6 · The paper itself

Abstract

The development of the progenitor zones in the pallium, lateral ganglionic eminence (LGE) and medial ganglionic eminence (MGE) in the subpallium has been well studied; however, so far the role of the caudal ganglionic eminence (CGE), a posterior subpallial domain, in telencephalon patterning remains poorly understood. COUP-TFII, an orphan nuclear receptor, is preferentially expressed in the CGE. We generated COUP-TFII mouse mutants, using Rx-Cre (RxCre;COUP-TFII(F/F)), to study its function in telencephalon development. In these mutants, we found severe defects in the formation of the amygdala complex, including the lateral (LA), basolateral (BLA) and basomedial (BMA) amygdala nuclei. Molecular analysis provided evidence that the migration of CGE-derived Pax6(+) cells failed to settle into the BMA nucleus, owing to reduced expression of neuropilin 1 (Nrp1) and Nrp2, two semaphorin receptors that regulate neuronal cell migration and axon guidance. Our ChIP assays revealed that Nrp1 and Nrp2 genes are the direct targets of COUP-TFII in the telencephalon in vivo. Furthermore, our results showed that the coordinated development between the CGE originated subpallial population (Pax6(+) cells) and pallial populations (Tbr1(+) and Lhx2(+) cells) was essential for patterning the amygdala assembly. Our study presented novel genetic evidence that the caudal ganglionic eminence, a distinct subpallial progenitor zone, contributes cells to the basal telencephalon, such as the BMA nucleus.

Indexed as

AmygdalaAnimalsChromatin ImmunoprecipitationCOUP Transcription Factor IIDNA PrimersGene Expression Regulation, DevelopmentalImmunohistochemistryMiceMice, Mutant StrainsNeuropilin-1Neuropilin-2Real-Time Polymerase Chain ReactionCOUP Transcription Factor IIDNA PrimersNeuropilin-1Neuropilin-2Nr2f2 protein, mouse

Identifiers

PMID22492355
PMCPMC3317968
OpenAlexW2126640721

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.