Evidence map›Paper›PMID 22491733›Full record

ArticleHaematologica2012

A critical appraisal of tools available for monitoring epigenetic changes in clinical samples from patients with myeloid malignancies.

Kirsten Grønbæk, Carsten Müller-Tidow, Giovanni Perini, Sören Lehmann, Marianne Bach Treppendahl, Ken Mills, Christoph Plass, Brigitte Schlegelberger, European Genomics and Epigenomics Study on MDS and AML (EuGESMA), COST Action BM0801

Open access · goldAbstract read
In one paragraph

Article in Haematologica, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Role of epigenetics in chronic myeloid leukemia.Current hematologic malignancy reports · 2013
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 8 institutions in 5 countries.

Kirsten GrønbækDepartment of Hematology, Rigshospitalet, Blegdamsvej 9, 2100 Copenhagen, Denmark. kirsten.groenbaek@rh.regionh.dk
Carsten Müller-Tidow
Giovanni Perini
Sören Lehmann
Marianne Bach Treppendahl
Ken Mills
Christoph Plass
Brigitte Schlegelberger
European Genomics and Epigenomics Study on MDS and AML (EuGESMA), COST Action BM0801
Heidelberg University · DEKarolinska Institutet · SEMedizinische Hochschule Hannover · DEQueen's University Belfast · GBRigshospitalet · DKUniversity Hospital Münster · DEUniversity of Bologna · ITUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Research over the past decade has confirmed that epigenetic alterations act in concert with genetic lesions to deregulate gene expression in acute myeloid leukemia and myelodysplastic syndromes. Epigenetic alterations may serve as markers of disease, and may potentially be used for classification, prognostication and to monitor minimal residual disease. In addition, we now have the capability to pharmaceutically target epigenetic modifications, and there is an urgent need for early validation of the efficacy of the drugs. Also, an improved understanding of the functionality of epigenetic modifications may further pave the road towards individualized therapy. The recent advances in biotechnology and bioinformatics provide a plethora of novel tools for characterizing the epigenome in clinical samples, but at this point the practical, clinical utility of these methodologies needs further exploration. Here, we provide the pros and cons of the currently most feasible methods used for characterizing the methylome in clinical samples, and give a brief introduction to novel approaches to sequencing that may revolutionize our abilities to characterize the genomes and epigenomes in acute myeloid leukemia and myelodysplastic syndrome patients.

Indexed as

Biomarkers, TumorDNA MethylationEpigenesis, GeneticGene Expression ProfilingHumansLeukemia, Myeloid, AcuteMyelodysplastic SyndromesMyeloproliferative DisordersPrognosisBiomarkers, Tumor

Identifiers

PMID22491733
PMCPMC3436239
OpenAlexW2023322396

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.