Evidence map›Paper›PMID 22491326›Full record

ArticleNature communications2012

Nanodomain Ca²⁺ of Ca²⁺ channels detected by a tethered genetically encoded Ca²⁺ sensor.

Lai Hock Tay, Ivy E Dick, Wanjun Yang, Marco Mank, Oliver Griesbeck, David T Yue

Open access · bronzeAbstract read
In one paragraph

Article in Nature communications, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
  2. Article
  3. Piezo1 ion channels are capable of conformational signaling.bioRxiv : the preprint server for biology · 2024
    Article
  4. Review
  5. Review
  6. Bound CaFrontiers in physiology · 2023
    Article
  7. Review
  8. Review
  9. Review
  10. CaThe Journal of biological chemistry · 2020
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. In vitro analyses of suspected arrhythmogenic thin filament variants as a cause of sudden cardiac death in infants.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  16. Article
  17. Review
  18. Glutamate-activated BK channel complexes formed with NMDA receptors.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Lai Hock TayDepartment of Biomedical Engineering, Calcium Signals Laboratory, Ross Building, Room 713, 720 Rutland Avenue, Baltimore, Maryland 21205-2196, USA.
Ivy E Dick
Wanjun Yang
Marco Mank
Oliver Griesbeck
David T Yue
Max Planck Institute of Neurobiology · DEJohns Hopkins University · US

Funding

PATHOPHYSIOLOGY OF MYOCARDIAL DISEASEST32HL007227 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI Chulan Kwon, WENDY S POST · 1985 to 2026
$21.2M
The Histology CoreP30DC005211 · NIDCD · JOHNS HOPKINS UNIVERSITY · PI YOUNG, ERIC DANIEL · 2002 to 2016
$9.1M
Ca Regulation of Ca ChannelsR01MH065531 · NIMH · JOHNS HOPKINS UNIVERSITY · PI JOHNY, MANU BEN · 2002 to 2016
$5.7M
NHLBI NIH HHS T32 HL007227NHLBI NIH HHS T32 HL07227-35NIDCD NIH HHS P30 DC005211NIMH NIH HHS R01 MH065531NIMH NIH HHS R01 MH65531
6 · The paper itself

Abstract

Coupling of excitation to secretion, contraction and transcription often relies on Ca(2+) computations within the nanodomain-a conceptual region extending tens of nanometers from the cytoplasmic mouth of Ca(2+) channels. Theory predicts that nanodomain Ca(2+) signals differ vastly from the slow submicromolar signals routinely observed in bulk cytoplasm. However, direct visualization of nanodomain Ca(2+) far exceeds optical resolution of spatially distributed Ca(2+) indicators. Here we couple an optical, genetically encoded Ca(2+) indicator (TN-XL) to the carboxy tail of Ca(V)2.2 Ca(2+) channels, enabling near-field imaging of the nanodomain. Under total internal reflection fluorescence microscopy, we detect Ca(2+) responses indicative of large-amplitude pulses. Single-channel electrophysiology reveals a corresponding Ca(2+) influx of only 0.085 pA, and fluorescence resonance energy transfer measurements estimate TN-XL distance to the cytoplasmic mouth at ~55 Å. Altogether, these findings raise the possibility that Ca(2+) exits the channel through the analogue of molecular portals, mirroring the crystallographic images of side windows in voltage-gated K channels.

Indexed as

CalciumCalcium Channels, N-TypeCytoplasmElectrophysiologyFluorescence Resonance Energy TransferGenetic EngineeringHEK293 CellsHumansKineticsCACNA1B protein, humanCalciumCalcium Channels, N-Type

Identifiers

PMID22491326
PMCPMC3615648
OpenAlexW2082277627

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.