Evidence map›Paper›PMID 22489150›Full record

ArticleInternational journal of molecular sciences2012

Applications of circular dichroism for structural analysis of gelatin and antimicrobial peptides.

Ramamourthy Gopal, Jin Soon Park, Chang Ho Seo, Yoonkyung Park

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 121 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ramamourthy GopalResearch Center for Proteineous Materials, Chosun University, Gwangju 501-759, Korea.
Jin Soon ParkDepartment of Biotechnology, Chosun University, Gwangju 501-759, Korea.
Chang Ho SeoDepartment of Bioinformatics, Kongju National University, Kongju, South Korea.
Yoonkyung ParkDepartment of Biotechnology, Chosun University, Gwangju 501-759, Korea.
Chosun University · KRKongju National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Circular dichroism (CD) is a useful technique for monitoring changes in the conformation of antimicrobial peptides or gelatin. In this study, interactions between cationic peptides and gelatin were observed without affecting the triple helical content of the gelatin, which was more strongly affected by anionic surfactant. The peptides did not adopt a secondary structure in the presence of aqueous solution or Tween 80, but a peptide secondary structure formed upon the addition of sodium dodecyl sulfate (SDS). The peptides bound to the phosphate group of lipopolysaccharide (LPS) and displayed an alpha-helical conformation while (KW)(4) adopted a folded conformation. Further, the peptides did not specifically interact with the fungal cell wall components of mannan or laminarin. Tryptophan blue shift assay indicated that these peptides interacted with SDS, LPS, and gelatin but not with Tween 80, mannan, or laminarin. The peptides also displayed antibacterial activity against P. aeruginosa without cytotoxicity against HaCaT cells at MIC, except for HPA3NT3-analog peptide. In this study, we used a CD spectroscopic method to demonstrate the feasibility of peptide characterization in numerous environments. The CD method can thus be used as a screening method of gelatin-peptide interactions for use in wound healing applications.

Indexed as

Amino Acid SequenceAnti-Bacterial AgentsAntimicrobial Cationic PeptidesCell LineCell WallCircular DichroismGelatinGlucansHumansLipopolysaccharidesMannansMolecular Sequence DataPolysorbatesProtein ConformationProtein Structure, SecondaryPseudomonas aeruginosaAnti-Bacterial AgentsAntimicrobial Cationic PeptidesGelatinGlucanslaminaranLipopolysaccharidesMannansPolysorbatesSodium Dodecyl SulfateSurface-Active AgentsTryptophanantimicrobial peptidescell wall componentscircular dichroismgelatinlipopolysaccharidereduced glutathionesodium dodecyl sulfateTween 80

Identifiers

PMID22489150
PMCPMC3317711
OpenAlexW2006681963

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.