ArticleInternational journal of molecular sciences2012
Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing.
Article in International journal of molecular sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 2 of them syntheses that pooled it.
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Who cites it
41 citing papers in PubMed, 2 syntheses or guidelines pooled it, 84 citations in OpenAlex.
- Integrative systems biology analysis of barley transcriptome ─ hormonal signaling against biotic stress.PloS one · 2023Pooled it
- What Do We Know about Barley miRNAs?International journal of molecular sciences · 2022Pooled it
- The Splicing Factor OsSCL26 Regulates Phosphorus Homeostasis in Rice.Plants (Basel, Switzerland) · 2023Article
- Genome-wide identification and expression profile analysis of metal tolerance protein gene family in Eucalyptus grandis under metal stresses.BMC plant biology · 2023Article
- Barley Seeds miRNome Stability during Long-Term Storage and Aging.International journal of molecular sciences · 2021Article
- Article
- Identification of novel drought-responsive miRNA regulatory network of drought stress response in common vetch (Open life sciences · 2021Article
- Identification and Functional Characterization of Plant MiRNA Under Salt Stress Shed Light on Salinity Resistance Improvement Through MiRNA Manipulation in Crops.Frontiers in plant science · 2021Review
- miRNA-mRNA Integrated Analysis Reveals Roles for miRNAs in a Typical Halophyte,Plants (Basel, Switzerland) · 2020Article
- Genome-wide identification, expression profiles and regulatory network of MAPK cascade gene family in barley.BMC genomics · 2019Article
- Genome-wide identification and characterization of the metal tolerance protein (MTP) family in grape (3 Biotech · 2019Article
- miR172 downregulates the translation of cleistogamy 1 in barley.Annals of botany · 2018Article
- Identification of microRNAs involved in drought stress responses in early-maturing cotton by high-throughput sequencing.Genes & genomics · 2018Article
- Characterization of Conserved and Novel microRNAs in Lilium lancifolium Thunb. by High-Throughput Sequencing.Scientific reports · 2018Article
- Article
- microRNAs participate in gene expression regulation and phytohormone cross-talk in barley embryo during seed development and germination.BMC plant biology · 2017Article
- Plant dehydrins: shedding light on structure and expression patterns of dehydrin gene family in barley.Journal of plant research · 2017Article
- Article
- Abiotic stress miRNomes in the Triticeae.Functional & integrative genomics · 2017Review
- Wheat miRNA ancestors: evident by transcriptome analysis of A, B, and D genome donors.Functional & integrative genomics · 2017Article
Corrections and comments
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Authors and funding
7 authors at 5 institutions in 4 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
MicroRNAs (miRNAs) are a class of endogenous RNAs that regulates the gene expression involved in various biological and metabolic processes. Barley is one of the most important cereal crops worldwide and is a model organism for genetic and genomic studies in Triticeae species. However, the miRNA research in barley has lagged behind other model species in grass family. To obtain more information of miRNA genes in barley, we sequenced a small RNA library created from a pool of equal amounts of RNA from four different tissues using Solexa sequencing. In addition to 126 conserved miRNAs (58 families), 133 novel miRNAs belonging to 50 families were identified from this sequence data set. The miRNA* sequences of 15 novel miRNAs were also discovered, suggesting the additional evidence for existence of these miRNAs. qRT-PCR was used to examine the expression pattern of six randomly selected miRNAs. Some miRNAs involved in drought and salt stress response were also identified. Furthermore, the potential targets of these putative miRNAs were predicted using the psRNATarget tools. Our results significantly increased the number of novel miRNAs in barley, which should be useful for further investigation into the biological functions and evolution of miRNAs in barley and other species.
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