Evidence map›Paper›PMID 22486314›Full record

ArticleHuman gene therapy2012

AAV-mediated gene targeting is significantly enhanced by transient inhibition of nonhomologous end joining or the proteasome in vivo.

Nicole K Paulk, Laura Marquez Loza, Milton J Finegold, Markus Grompe

Abstract read
In one paragraph

Article in Human gene therapy, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. State-of-the-art 2023 on gene therapy for phenylketonuria.Journal of inherited metabolic disease · 2024
    Review
  6. Article
  7. Article
  8. Improved Genome Editing through Inhibition of FANCM and Members of the BTR Dissolvase Complex.Molecular therapy : the journal of the American Society of Gene Therapy · 2021
    Article
  9. Article
  10. Review
  11. AAV-Mediated CRISPR/Cas9 Gene Editing in Murine Phenylketonuria.Molecular therapy. Methods & clinical development · 2020
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Genome Engineering Using Adeno-associated Virus: Basic and Clinical Research Applications.Molecular therapy : the journal of the American Society of Gene Therapy · 2016
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Nicole K PaulkOregon Stem Cell Center, Oregon Health and Science University, Portland, OR 97239, USA.
Laura Marquez Loza
Milton J Finegold
Markus Grompe

Funding

Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Geoffrey A Preidis · 2001 to 2026
$28.3M
Treatment of Distal Tyrosine Pathway DisordersR01DK048252 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI GROMPE, MARKUS · 1994 to 2017
$5.5M
Determining the Progenitor-Like Capacity of Liver Cancer Cells in vivo.F31CA130116 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI PAULK, NICOLE K · 2007 to 2011
$182k
NCI NIH HHS F31 CA130116NCI NIH HHS F31-CA130116NIDDK NIH HHS P30 DK056338NIDDK NIH HHS P30-DK56338NIDDK NIH HHS R01-DK48252
6 · The paper itself

Abstract

Recombinant adeno-associated virus (rAAV) vectors have clear potential for use in gene targeting but low correction efficiencies remain the primary drawback. One approach to enhancing efficiency is a block of undesired repair pathways like nonhomologous end joining (NHEJ) to promote the use of homologous recombination. The natural product vanillin acts as a potent inhibitor of NHEJ by inhibiting DNA-dependent protein kinase (DNA-PK). Using a homology containing rAAV vector, we previously demonstrated in vivo gene repair frequencies of up to 0.1% in a model of liver disease hereditary tyrosinemia type I. To increase targeting frequencies, we administered vanillin in combination with rAAV. Gene targeting frequencies increased up to 10-fold over AAV alone, approaching 1%. Fah(-/-)Ku70(-/-) double knockout mice also had increased gene repair frequencies, genetically confirming the beneficial effects of blocking NHEJ. A second strategy, transient proteasomal inhibition, also increased gene-targeting frequencies but was not additive to NHEJ inhibition. This study establishes the benefit of transient NHEJ inhibition with vanillin, or proteasome blockage with bortezomib, for increasing hepatic gene targeting with rAAV. Functional metabolic correction of a clinically relevant disease model was demonstrated and provided evidence for the feasibility of gene targeting as a therapeutic strategy.

Indexed as

Gene TargetingGenetic VectorsAnimalsAntineoplastic AgentsBenzaldehydesBoronic AcidsBortezomibDependovirusDisease Models, AnimalDNA End-Joining RepairImmunohistochemistryMiceMice, KnockoutPlasmidsPolymerase Chain ReactionProteasome Endopeptidase ComplexAntineoplastic AgentsBenzaldehydesBoronic AcidsBortezomibProteasome Endopeptidase ComplexPyrazinesRecombinant Proteinsvanillin

Identifiers

PMID22486314
PMCPMC3392621

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.