Evidence map›Paper›PMID 22484857›Full record

ArticleEuropean biophysics journal : EBJ2012

On the simple random-walk models of ion-channel gate dynamics reflecting long-term memory.

Agata Wawrzkiewicz, Krzysztof Pawelek, Przemyslaw Borys, Beata Dworakowska, Zbigniew J Grzywna

Abstract read
In one paragraph

Article in European biophysics journal : EBJ, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
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  6. The fractal brain: scale-invariance in structure and dynamics.Cerebral cortex (New York, N.Y. : 1991) · 2023
    Review
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  12. Review
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  14. Article
  15. Elements of the cellular metabolic structure.Frontiers in molecular biosciences · 2015
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Agata WawrzkiewiczDepartment of Physical Chemistry and Technology of Polymers, Section of Physics and Applied Mathematics, Silesian University of Technology, Ks. M. Strzody 9, 44-100 Gliwice, Poland. agata.wawrzkiewicz@gmail.com
Krzysztof Pawelek
Przemyslaw Borys
Beata Dworakowska
Zbigniew J Grzywna

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several approaches to ion-channel gating modelling have been proposed. Although many models describe the dwell-time distributions correctly, they are incapable of predicting and explaining the long-term correlations between the lengths of adjacent openings and closings of a channel. In this paper we propose two simple random-walk models of the gating dynamics of voltage and Ca(2+)-activated potassium channels which qualitatively reproduce the dwell-time distributions, and describe the experimentally observed long-term memory quite well. Biological interpretation of both models is presented. In particular, the origin of the correlations is associated with fluctuations of channel mass density. The long-term memory effect, as measured by Hurst R/S analysis of experimental single-channel patch-clamp recordings, is close to the behaviour predicted by our models. The flexibility of the models enables their use as templates for other types of ion channel.

Indexed as

Models, BiologicalCell LineComputer SimulationElectrophysiologyEpithelial CellsHumansIon Channel GatingKineticsLarge-Conductance Calcium-Activated Potassium ChannelsMembrane PotentialsMemory, Long-TermModels, MolecularModels, StatisticalPatch-Clamp TechniquesLarge-Conductance Calcium-Activated Potassium Channels

Identifiers

PMID22484857
PMCPMC3359465

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.