Evidence map›Paper›PMID 22484849›Full record

ArticleNature methods2012

FLEXIQinase, a mass spectrometry-based assay, to unveil multikinase mechanisms.

Sasha A Singh, Dominic Winter, Parizad M Bilimoria, Azad Bonni, Hanno Steen, Judith A Steen

Abstract read
In one paragraph

Article in Nature methods, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Oligomer formation of tau protein hyperphosphorylated in cells.The Journal of biological chemistry · 2014
    Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Sasha A SinghDepartment of Pathology, Children's Hospital Boston and Harvard Medical School, Boston, Massachusetts, USA.
Dominic Winter
Parizad M Bilimoria
Azad Bonni
Hanno Steen
Judith A Steen
Boston Children's Hospital · USHarvard University · US

Funding

SIGNAL TRANSDUCTION PATHWAYS REGULATING NEURON SURVIVALR01NS041021 · NINDS · WASHINGTON UNIVERSITY · PI GABEL, HARRISON W · 2001 to 2023
$7.7M
Quantifying post-translational modifications and protein expression by HTP-MSRC4GM096319 · NIGMS · HARVARD MEDICAL SCHOOL · PI KIRSCHNER, MARC WALLACE · 2010 to 2010
$3.8M
Regulation of SMN and Identification of its Downstream TargetR01NS066973 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI STEEN, JUDITH A · 2010 to 2014
$2.2M
Complex Dynamics in Multisite PhosphorylationR01GM081578 · NIGMS · HARVARD MEDICAL SCHOOL · PI GUNAWARDENA, JEREMY · 2008 to 2011
$1.4M
Defining the true nature of the minimal cell cycle with quantitative proteomicsR01GM094844 · NIGMS · BOSTON CHILDREN'S HOSPITAL · PI STEEN, HANNO · 2010 to 2013
$1.4M
Cell Cycle Regulation of Neuronal ApoptosisR01NS047188 · NINDS · HARVARD MEDICAL SCHOOL · PI BONNI, AZAD · 2007 to 2010
$1.3M
NIGMS NIH HHS GM081578NIGMS NIH HHS GM094844NIGMS NIH HHS GM096319NIGMS NIH HHS R01 GM081578NIGMS NIH HHS R01 GM094844NIGMS NIH HHS RC4 GM096319NINDS NIH HHS NS041021NINDS NIH HHS NS047188NINDS NIH HHS NS066973NINDS NIH HHS R01 NS041021NINDS NIH HHS R01 NS047188NINDS NIH HHS R01 NS066973
6 · The paper itself

Abstract

We introduce a mass spectrometry-based method that provides residue-resolved quantitative information about protein phosphorylation. In this assay we combined our full-length expressed stable isotope-labeled protein for quantification strategy (FLEXIQuant) with a traditional kinase assay to determine the mechanisms of multikinase substrate phosphorylation such as priming-dependent kinase activities. The assay monitors the decrease in signal intensity of the substrate peptides and the concomitant increase in the (n × 80 Da)-shifted phosphorylated peptide. We analyzed the c-Jun N-terminal kinase (JNK)-dependent glycogen synthase kinase 3β (GSK3β) activity on doublecortin (DCX) revealing mechanistic details about the role of phosphorylation cross-talk in GSK3β activity and permitting an advanced model for GSK3β-mediated signaling.

Indexed as

Doublecortin Domain ProteinsGlycogen Synthase Kinase 3JNK Mitogen-Activated Protein KinasesMicrotubule-Associated ProteinsNeuropeptidesPhosphorylationSignal TransductionTandem Mass SpectrometryDoublecortin Domain ProteinsGlycogen Synthase Kinase 3JNK Mitogen-Activated Protein KinasesMicrotubule-Associated ProteinsNeuropeptides

Identifiers

PMID22484849
PMCPMC3595540
OpenAlexW2146209359

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.