Evidence map›Paper›PMID 22484627›Full record

SynthesisNature genetics2012

A genome-wide association meta-analysis identifies new childhood obesity loci.

Jonathan P Bradfield, H Rob Taal, Nicholas J Timpson, André Scherag, Cecile Lecoeur, Nicole M Warrington, Elina Hypponen, Claus Holst, Beatriz Valcarcel, Elisabeth Thiering and 72 more

Registry-linked trialOpen access · greenAbstract readComparative StudyMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05466097 (Development of Polygenic Risk Score to Predict the Efficacy of Weight Loss Intervention in Children and Adolescents With Obesity), which is not on this map. Cited by 236 papers, 27 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
236citing papers in PubMed, 27 pooled it
29.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05466097 unknown statusnot on this mapstarted 2022, after this paper: background citation

Development of Polygenic Risk Score to Predict the Efficacy of Weight Loss Intervention in Children and Adolescents With Obesity

Typeobservational_patient_registrySponsorFar Eastern Memorial HospitalRan2022 to 2025Enrolled300ConditionsObesity, Children
3 · Its place in the literature

Who cites it

236 citing papers in PubMed, 27 syntheses or guidelines pooled it, 431 citations in OpenAlex.

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176 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

82 authors at 20 institutions in 13 countries.

Jonathan P BradfieldCenter for Applied Genomics, Abramson Research Center, The Children’s Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
H Rob Taal
Nicholas J Timpson
André Scherag
Cecile Lecoeur
Nicole M Warrington
Elina Hypponen
Claus Holst
Beatriz Valcarcel
Elisabeth Thiering
Rany M Salem
Fredrick R Schumacher
Diana L Cousminer
Patrick M A Sleiman
Jianhua Zhao
Robert I Berkowitz
Karani S Vimaleswaran
Ivonne Jarick
Craig E Pennell
David M Evans
Beate St Pourcain
Diane J Berry
Dennis O Mook-Kanamori
Albert Hofman
Fernando Rivadeneira
André G Uitterlinden
Cornelia M van Duijn
Ralf J P van der Valk
Johan C de Jongste
Dirkje S Postma
Dorret I Boomsma
W James Gauderman
Mohamed T Hassanein
Cecilia M Lindgren
Reedik Mägi
Colin A G Boreham
Charlotte E Neville
Luis A Moreno
Paul Elliott
Anneli Pouta
Anna-Liisa Hartikainen
Mingyao Li
Olli Raitakari
Terho Lehtimäki
Johan G Eriksson
Aarno Palotie
Jean Dallongeville
Shikta Das
Panos Deloukas
George McMahon
Susan M Ring
John P Kemp
Jessica L Buxton
Alexandra I F Blakemore
Mariona Bustamante
Mònica Guxens
Joel N Hirschhorn
Matthew W Gillman
Eskil Kreiner-Møller
Hans Bisgaard
Frank D Gilliland
Joachim Heinrich
Eleanor Wheeler
Inês Barroso
Stephen O'Rahilly
Aline Meirhaeghe
Thorkild I A Sørensen
Chris Power
Lyle J Palmer
Anke Hinney
Elisabeth Widen
I Sadaf Farooqi
Mark I McCarthy
Philippe Froguel
David Meyre
Johannes Hebebrand
Marjo-Riitta Jarvelin
Vincent W V Jaddoe
George Davey Smith
Hakon Hakonarson
Struan F A Grant
Early Growth Genetics Consortium
Erasmus MC · NLChildren's Hospital of Philadelphia · USBroad Institute · USUniversity of Helsinki · FIPublic Health England · GBUniversity of Bristol · GBUniversity of Cambridge · GBCentre for Human Genetics · GBCentre National de la Recherche Scientifique · FRUniversitat Pompeu Fabra · ESUniversity College London · GBUniversity Medical Center Groningen · NLUniversity of Southern California · USCenter for Research in Environmental Epidemiology · ESUniversity of Duisburg-Essen · DECopenhagen Prospective Studies on Asthma in Childhood · DKHelmholtz Zentrum München · DEImperial College London · GBInserm · FRNovo Nordisk Foundation · DK

Funding

Type 1 Diabetes Genetics ConsortiumU01DK062418 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI RICH, STEPHEN S. · 2002 to 2007
$59.8M
Translational Research Support CoreP30ES007048 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ROB S MCCONNELL · 1996 to 2026
$46.4M
Urban Air Pollution and Children's Respiratory HealthP01ES011627 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GAUDERMAN, WILLIAM JAMES · 2002 to 2011
$30.2M
Cell Interactions in the Inflamed Intestinal MucosaR01DK075787 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI JOEL N HIRSCHHORN · 2007 to 2026
$13.1M
Carolina Population CenterR24HD050924 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MORGAN, SAMUEL PHILIP · 2005 to 2014
$10.0M
Genome Wide Association Study for Childhood ObesityR01HD056465 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI GRANT, STRUAN F A · 2008 to 2024
$9.5M
The Asthma BioRepository for Integrative Genomics ResearchRC2HL101543 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI RABY, BENJAMIN ALEXANDER, WEISS, SCOTT T · 2009 to 2010
$8.3M
The EVE Asthma Genetics Consortium: Building Upon GWASRC2HL101651 · NHLBI · UNIVERSITY OF CHICAGO · PI NICOLAE, DAN LIVIU, OBER, CAROLE · 2009 to 2010
$7.4M
Urban Air Pollution &Persistent Early Life AsthmaP01ES009581 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GILLILAND, FRANK D. · 1999 to 2010
$6.8M
FACTORS IN CHILDHOOD LUNG SUSCEPTIBILITY TO POLLUTIONR01HL061768 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GILLILAND, FRANK D. · 1999 to 2008
$4.4M
A Genome-wide Association Study of Childhood Respiratory OutcomesR01HL087680 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GAUDERMAN, WILLIAM JAMES · 2007 to 2009
$4.1M
Air Pollution, Intima-media Thickness, and Lung Function in College StudentsR01ES014708 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI AVOL, EDWARD · 2006 to 2010
$4.0M
British Heart Foundation PG/09/023British Heart Foundation PG/09/023/26806British Heart Foundation PG/1996183/9569CIHR MOP-82893Department of Health PHCS/C4/4/016Medical Research Council 74882Medical Research Council G0000934Medical Research Council G0100103Medical Research Council G0400546Medical Research Council G0500539Medical Research Council G0600705Medical Research Council G0600717Medical Research Council G0601653Medical Research Council G0800582Medical Research Council G0801056Medical Research Council G0900554Medical Research Council MC_UP_A620_1014NHLBI NIH HHS 1RC2HL101543NHLBI NIH HHS 1RC2HL101651NHLBI NIH HHS 5R01HL061768NHLBI NIH HHS 5R01HL076647NHLBI NIH HHS 5R01HL087679-02NHLBI NIH HHS 5R01HL087680NHLBI NIH HHS R01 HL061768NHLBI NIH HHS R01 HL076647NHLBI NIH HHS R01 HL087679NHLBI NIH HHS R01 HL087680NHLBI NIH HHS RC2 HL101543NHLBI NIH HHS RC2 HL101651NICHD NIH HHS R01 HD056465NICHD NIH HHS R24 HD050924NIDDK NIH HHS R01 DK075787NIDDK NIH HHS U01 DK062418NIEHS NIH HHS 5P01ES009581NIEHS NIH HHS 5P01ES011627NIEHS NIH HHS 5P30ES007048NIEHS NIH HHS 5R01ES014447NIEHS NIH HHS 5R01ES014708NIEHS NIH HHS 5R01ES016535NIEHS NIH HHS 5R03ES014046NIEHS NIH HHS P01 ES009581NIEHS NIH HHS P01 ES011627NIEHS NIH HHS P30 ES007048NIEHS NIH HHS R01 ES014447NIEHS NIH HHS R01 ES014708NIEHS NIH HHS R01 ES016535NIEHS NIH HHS R03 ES014046NIMH NIH HHS 1RL1MH083268-01NIMH NIH HHS 5R01MH63706:02NIMH NIH HHS R01 MH063706NIMH NIH HHS RL1 MH083268ORD VA RD831861-01Wellcome Trust 052515/2/97/2Wellcome Trust 068545/Z/02Wellcome Trust 076467Wellcome Trust 077016/Z/05/ZWellcome Trust 083948Wellcome Trust 086596/Z/08/ZWellcome Trust 090532Wellcome Trust 092731Wellcome Trust 098395Wellcome Trust GR069224Wellcome Trust WT088431MA
6 · The paper itself

Abstract

Multiple genetic variants have been associated with adult obesity and a few with severe obesity in childhood; however, less progress has been made in establishing genetic influences on common early-onset obesity. We performed a North American, Australian and European collaborative meta-analysis of 14 studies consisting of 5,530 cases (≥95th percentile of body mass index (BMI)) and 8,318 controls (<50th percentile of BMI) of European ancestry. Taking forward the eight newly discovered signals yielding association with P < 5 × 10(-6) in nine independent data sets (2,818 cases and 4,083 controls), we observed two loci that yielded genome-wide significant combined P values near OLFM4 at 13q14 (rs9568856; P = 1.82 × 10(-9); odds ratio (OR) = 1.22) and within HOXB5 at 17q21 (rs9299; P = 3.54 × 10(-9); OR = 1.14). Both loci continued to show association when two extreme childhood obesity cohorts were included (2,214 cases and 2,674 controls). These two loci also yielded directionally consistent associations in a previous meta-analysis of adult BMI(1).

Indexed as

Genetic LociGenetic MarkersGenome-Wide Association StudyAdolescentAdultBody Mass IndexCase-Control StudiesGenetic Predisposition to DiseaseHumansObesityPolymorphism, Single NucleotideYoung AdultGenetic Markers

Identifiers

PMID22484627
PMCPMC3370100
OpenAlexW1983270011

What OpenQuestion holds

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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.