Evidence map›Paper›PMID 22482708›Full record

ReviewCurrent opinion in virology2012

Structure and cell biology of archaeal virus STIV.

Chi-yu Fu, Johnson E Johnson

Abstract readReview
In one paragraph

Review in Current opinion in virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
  3. The Basic Architecture of Viruses.Sub-cellular biochemistry · 2024
    Review
  4. Viruses of theFrontiers in microbiology · 2023
    Review
  5. Article
  6. Review
  7. Archaeal extrachromosomal genetic elements.Microbiology and molecular biology reviews : MMBR · 2015
    Review
  8. Article
  9. Molecular biology of fuselloviruses and their satellites.Extremophiles : life under extreme conditions · 2014
    Review
  10. Article
  11. Functional interplay between a virus and the ESCRT machinery in archaea.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  12. Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  13. Article
  14. Review
  15. Lipids of archaeal viruses.Archaea (Vancouver, B.C.) · 2012
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Chi-yu FuDepartment of Molecular Biology, The Scripps Research Institute, La Jolla, CA, USA.
Johnson E Johnson
Scripps Research Institute · US

Funding

Studies of large and small-scale virus capsid dynamicsR01GM054076 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI JOHNSON, JOHN EMIL · 1995 to 2014
$6.2M
Structural Characterization of Archaeal Virus Assembly and Host InteractionsK99GM098393 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI FU, CHI-YU · 2011 to 2012
$176k
NIGMS NIH HHS 1K99GM098393NIGMS NIH HHS GM54076NIGMS NIH HHS K99 GM098393NIGMS NIH HHS R01 GM054076
6 · The paper itself

Abstract

Recent investigations of archaeal viruses have revealed novel features of their structures and life cycles when compared to eukaryotic and bacterial viruses, yet there are structure-based unifying themes suggesting common ancestral relationships among dsDNA viruses in the three kingdoms of life. Sulfolobus solfataricus and the infecting virus Sulfolobus turreted icosahedral virus (STIV) is one of the well-established model systems to study archaeal virus replication and viral-host interactions. Reliable laboratory conditions to propagate STIV and available genetic tools allowed structural characterization of the virus and viral components that lead to the proposal of common capsid ancestry with PRD1 (bacteriophage), Adenovirus (eukaryotic virus) and PBCV (chlorellavirus). Microarray and proteomics approaches systematically analyzed viral replication and the corresponding host responses. Cellular cryo-electron tomography and thin-section EM studies uncovered the assembly and maturation pathway of STIV and revealed dramatic cellular ultra-structure changes upon infection. The viral-induced pyramid-like protrusions on cell surfaces represent a novel viral release mechanism and previously uncharacterized functions in viral replication.

Indexed as

Archaeal VirusesDNA VirusesHost-Pathogen InteractionsSulfolobusVirus Replication

Identifiers

PMID22482708
PMCPMC3322382
OpenAlexW2019003810

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.