ArticleGenetics and molecular biology2012
The complete mitochondrial genome of the small yellow croaker and partitioned Bayesian analysis of Sciaenidae fish phylogeny.
Article in Genetics and molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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16 citing papers in PubMed.
- Complete Mitochondrial Genome of Turrum coeruleopinnatum Provides Phylogenetic Context and Candidate Selection Signals Within Carangidae.Biochemical genetics · 2026Article
- Characterization of the Complete Mitochondrial Genome ofBiology · 2026Article
- Characterization of Complete Mitochondrial Genome and Phylogeny of Three Echeneidae Species.Animals : an open access journal from MDPI · 2025Article
- The mitochondrial genome and phylogenetic analysis of Rhacophorus rhodopus.Scientific reports · 2022Article
- The complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2020Article
- A first genetic linage map construction and QTL mapping for growth traits in Larimichthys polyactis.Scientific reports · 2020Article
- Sequencing and Characterization of Mitochondrial Protein-Coding Genes forBioMed research international · 2020Article
- Two complete mitochondrial genomes ofMitochondrial DNA. Part B, Resources · 2019Article
- Particular gene order and complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2019Article
- Complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2018Article
- Complete mitochondrial genome of Red bigeye (Mitochondrial DNA. Part B, Resources · 2018Article
- Characterization of the Complete Mitochondrial Genome Sequences of Three Croakers (Perciformes, Sciaenidae) and Novel Insights into the Phylogenetics.International journal of molecular sciences · 2018Article
- Complete mitochondrial genome of Japanese bigeye (Mitochondrial DNA. Part B, Resources · 2016Article
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- The first complete mitochondrial genome from Bostrychus genus (Bostrychus sinensis) and partitioned Bayesian analysis of Eleotridae fish phylogeny.Journal of genetics · 2013Article
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4 authors.
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Abstract
To understand the phylogenetic position of Larimichthys polyactis within the family Sciaenidae and the phylogeny of this family, the organization of the mitochondrial genome of small yellow croaker was determined herein. The complete, 16,470 bp long, mitochondrial genome contains 37 mitochondrial genes (13 protein-coding, 2 ribosomal RNA and 22 transfer RNA genes), as well as a control region (CR), as in other bony fishes. Comparative analysis of initiation/termination codon usage in mitochondrial protein-coding genes of Percoidei species, indicated that COI in Sciaenidae entails an ATG/AGA codon usage different from other Percoidei fishes, where absence of a typical conserved domain or motif in the control regions is common. Partitioned Bayesian analysis of 618 bp of COI sequences data were used to infer the phylogenetic relationships within the family Sciaenidae. An improvement in harmonic mean -lnL was observed when specific models and parameter estimates were assumed for partitions of the total data. The phylogenetic analyses did not support the monophyly of Otolithes, Argyrosomus, and Argyrosominae. L. polyactis was found to be most closely related to Collichthys niveatus, whereby, according to molecular systematics studies, the relationships within the subfamily Pseudosciaenidae should be reconsidered.
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