Evidence map›Paper›PMID 22479468›Full record

ArticlePloS one2012

Functional identification and characterization of the Brassica napus transcription factor gene BnAP2, the ortholog of Arabidopsis thaliana APETALA2.

Xiaohong Yan, Lei Zhang, Bo Chen, Zhiyong Xiong, Chunli Chen, Lijun Wang, Jingyin Yu, Changming Lu, Wenhui Wei

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Lipid regulation inFrontiers in plant science · 2026
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  10. DefectiveFrontiers in plant science · 2018
    Article
  11. Article
  12. AP2/ERF Transcription Factor,Frontiers in plant science · 2017
    Article
  13. Article
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  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Xiaohong YanKey Laboratory of Oil Crop Biology and Genetic Breeding of the Ministry of Agriculture, Institute of Oil Crops, Chinese Academy of Agricultural Sciences, Wuhan, China.
Lei Zhang
Bo Chen
Zhiyong Xiong
Chunli Chen
Lijun Wang
Jingyin Yu
Changming Lu
Wenhui Wei
Chinese Academy of Agricultural Sciences · CNHuazhong Agricultural University · CNOil Crops Research Institute · CNUniversity of Missouri · USWuhan University · CN

Funding

Transgenic Mouse and Biobank CoreP01CA095616 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI DEPINHO, RONALD ANTHONY · 2003 to 2012
$20.3M
NCI NIH HHS P01 CA095616
6 · The paper itself

Abstract

BnAP2, an APETALA2 (AP2)-like gene, has been isolated from Brassica napus cultivar Zhongshuang 9. The cDNA of BnAP2, with 1, 299 bp in length, encoded a transcription factor comprising of 432 amino acid residues. Results from complementary experiment indicated that BnAP2 was completely capable of restoring the phenotype of Arabidopsis ap2-11 mutant. Together with the sequence and expression data, the complementation data suggested that BnAP2 encodes the ortholog of AtAP2. To address the transcriptional activation of BnAP2, we performed transactivation assays in yeast. Fusion protein of BnAP2 with GAL4 DNA binding domain strongly activated transcription in yeast, and the transactivating activity of BnAP2 was localized to the N-terminal 100 amino acids. To further study the function of BnAP2 involved in the phenotype of B. napus, we used a transgenic approach that involved targeted RNA interference (RNAi) repression induced by ihp-RNA. Floral various phenotype defectives and reduced female fertility were observed in B. napus BnAP2-RNAi lines. Loss of the function of BnAP2 gene also resulted in delayed sepal abscission and senescence with the ethylene-independent pathway. In the strong BnAP2-RNAi lines, seeds showed defects in shape, structure and development and larger size. Strong BnAP2-RNAi and wild-type seeds initially did not display a significant difference in morphology at 10 DAF, but the development of BnAP2-RNAi seeds was slower than that of wild type at 20 DAF, and further at 30 DAF, wild-type seeds were essentially at their final size, whereas BnAP2-RNAi seeds stopped growing and developing and gradually withered.

Indexed as

AgingAmino Acid SequenceArabidopsisArabidopsis ProteinsBrassica napusEthylenesFertilityFlowersGene DosageGene Expression ProfilingGene OrderGenetic Complementation TestHomeodomain ProteinsMolecular Sequence DataMutationNuclear ProteinsAPETALA2 protein, ArabidopsisArabidopsis ProteinsethyleneEthylenesHomeodomain ProteinsNuclear ProteinsPlant ProteinsTranscription Factors

Identifiers

PMID22479468
PMCPMC3314020
OpenAlexW1996602472

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.