Evidence map›Paper›PMID 22476717›Full record

ArticleThe Journal of infectious diseases2012

HIV infection and antiretroviral therapy have divergent effects on mitochondria in adipose tissue.

Caryn G Morse, Joachim G Voss, Goran Rakocevic, Mary McLaughlin, Carol L Vinton, Charles Huber, Xiaojun Hu, Jun Yang, Da Wei Huang, Carolea Logun and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 59 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Gene Expression: the Key to Understanding HIV-1 Infection?Microbiology and molecular biology reviews : MMBR · 2020
    Review
  10. Observational
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Adipose Tissue in HIV Infection.Comprehensive Physiology · 2017
    Review
  19. Article
  20. Mechanisms of Accelerated Liver Fibrosis Progression during HIV Infection.Journal of clinical and translational hepatology · 2016
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 1 country.

Caryn G MorseLaboratory of Immunoregulation, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland 20892-1403, USA. cmorse@mail.nih.gov
Joachim G Voss
Goran Rakocevic
Mary McLaughlin
Carol L Vinton
Charles Huber
Xiaojun Hu
Jun Yang
Da Wei Huang
Carolea Logun
Robert L Danner
Zoila G Rangel
Peter J Munson
Jan M Orenstein
Elisabeth J Rushing
Richard A Lempicki
Marinos C Dalakas
Joseph A Kovacs
National Institutes of Health Clinical Center · USScience Applications International Corporation (United States) · USCenter for Information Technology · USThomas Jefferson University · USArmed Forces Institute of Pathology · USGeorge Washington University · USNational Institute of Allergy and Infectious Diseases · USNational Institutes of Health · USNeurobehavioral Systems · US

Funding

Statistical And Computational Methods For Gene Expression and Proteomic AnalysisZIACT000266 · CIT · CENTER FOR INFORMATION TECHNOLOGY · PI MUNSON, PETER J · 2009 to 2016
$4.2M
Development of a Biomarker for Fatigue in HIV/AIDSK22NR008672 · NINR · UNIVERSITY OF WASHINGTON · PI VOSS, JOACHIM G · 2006 to 2007
$291k
Functional Genomics of Inflammation and Critical IllnessZIACL001164 · CLC · CLINICAL CENTER · PI DANNER, ROBERT L · 2009 to 2018
$0k
Evaluation of HIV-related ComplicationsZIACL008075 · CLC · CLINICAL CENTER · PI KOVACS, JOSEPH A · 2009 to 2025
$0k
CCR NIH HHS HHSN261200800001CIntramural NIH HHSNCI NIH HHS HHSN261200800001ENINR NIH HHS K22 NR008672NINR NIH HHS K-22 NR008672-01
6 · The paper itself

Abstract

backgroundAlthough human immunodeficiency virus (HIV) infection and antiretroviral therapy (ART) affect mitochondrial DNA (mtDNA) content and function, comprehensive evaluations of their effects on mitochondria in muscle, adipose tissue, and blood cells are limited.

methodsMitochondrial DNA quantification, mitochondrial genome sequencing, and gene expression analysis were performed on muscle, adipose tissue, and peripheral blood mononuclear cell (PBMC) samples from untreated HIV-positive patients, HIV-positive patients receiving nucleoside reverse transcriptase inhibitor (NRTI)-based ART, and HIV-negative controls.

resultsThe adipose tissue mtDNA/nuclear DNA (nDNA) ratio was increased in untreated HIV-infected patients (ratio, 353) and decreased in those receiving ART (ratio, 162) compared with controls (ratio, 255; P < .05 for both comparisons); the difference between the 2 HIV-infected groups was also significant (P = .002). In HIV-infected participants, mtDNA/nDNA in adipose tissue correlated with the level of activation (CD38+ /HLA-DR+) for CD4+ and CD8+ lymphocytes. No significant differences in mtDNA content were noted in muscle or PMBCs among groups. Exploratory DNA microarray analysis identified differential gene expression between patient groups, including a subset of adipose tissue genes.

conclusionsHIV infection and ART have opposing effects on mtDNA content in adipose tissue; immune activation may mediate the effects of HIV, whereas NRTIs likely mediate the effects of ART.

Indexed as

Antiretroviral Therapy, Highly ActiveAdipose TissueAdolescentAdultAnti-HIV AgentsDNA, MitochondrialFemaleHIV InfectionsHumansLeukocytes, MononuclearMaleMiddle AgedMitochondriaMusclesYoung AdultAnti-HIV AgentsDNA, Mitochondrial

Identifiers

PMID22476717
PMCPMC3357134
OpenAlexW2144386999

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.