Evidence map›Paper›PMID 22474347›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Induction of lignocellulose-degrading enzymes in Neurospora crassa by cellodextrins.

Elizabeth A Znameroski, Samuel T Coradetti, Christine M Roche, Jordan C Tsai, Anthony T Iavarone, Jamie H D Cate, N Louise Glass

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers.

0numbers the graph read from it
0cells of the map it votes in
114citing papers in PubMed
15.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

114 citing papers in PubMed, 234 citations in OpenAlex.

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  14. Functional Study of cAMP-Dependent Protein Kinase A inJournal of fungi (Basel, Switzerland) · 2023
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  17. Regulation of nutrient utilization in filamentous fungi.Applied microbiology and biotechnology · 2023
    Review
  18. Review
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  20. Article

54 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Elizabeth A ZnameroskiDepartment of Molecular and Cell Biology, QB3), University of California, Berkeley, CA 94720, USA.
Samuel T Coradetti
Christine M Roche
Jordan C Tsai
Anthony T Iavarone
Jamie H D Cate
N Louise Glass
Institute of Plant and Microbial Biology, Academia Sinica · TWDivision of Chemistry · USInstitute of Molecular and Cell Biology · RUQB3 · US

Funding

Tools for Functional Analysis and Cell BiologyP01GM068087 · NIGMS · DARTMOUTH COLLEGE · PI DUNLAP, JAY C. · 2004 to 2013
$19.3M
QTOF MASS SPECTROMETER: CELL MOLECULAR BIOLOGY, PROTEIN STRUCTURES10RR022393 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI WILLIAMS, EVAN R · 2006 to 2006
$499k
NCRR NIH HHS 1S10RR022393-01NCRR NIH HHS S10 RR022393NIGMS NIH HHS P01 GM068087
6 · The paper itself

Abstract

Neurospora crassa colonizes burnt grasslands in the wild and metabolizes both cellulose and hemicellulose from plant cell walls. When switched from a favored carbon source such as sucrose to cellulose, N. crassa dramatically upregulates expression and secretion of a wide variety of genes encoding lignocellulolytic enzymes. However, the means by which N. crassa and other filamentous fungi sense the presence of cellulose in the environment remains unclear. Here, we show that an N. crassa mutant carrying deletions of two genes encoding extracellular β-glucosidase enzymes and one intracellular β-glucosidase lacks β-glucosidase activity, but efficiently induces cellulase gene expression in the presence of cellobiose, cellotriose, or cellotetraose as a sole carbon source. These data indicate that cellobiose, or a modified version of cellobiose, functions as an inducer of lignocellulolytic gene expression in N. crassa. Furthermore, the inclusion of a deletion of the catabolite repressor gene, cre-1, in the triple β-glucosidase mutant resulted in a strain that produces higher concentrations of secreted active cellulases on cellobiose. Thus, the ability to induce cellulase gene expression using a common and soluble carbon source simplifies enzyme production and characterization, which could be applied to other cellulolytic filamentous fungi.

Indexed as

CellobioseCellulaseCellulasesCelluloseCluster AnalysisDextrinsFungal ProteinsGene DeletionGene Expression ProfilingGene Expression Regulation, EnzymologicGene Expression Regulation, FungalLigninMass SpectrometryMutationNeurospora crassaPhylogenyCellobiosecellodextrincellotetraoseCellulaseCellulasesCelluloseDextrinsFungal ProteinsLigninlignocelluloseTetrosesTrioses

Identifiers

PMID22474347
PMCPMC3341005
OpenAlexW2064938664

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.