Evidence map›Paper›PMID 22474326›Full record

ArticleThe Journal of biological chemistry2012

Calcium-induced conformational changes in C-terminal tail of polycystin-2 are necessary for channel gating.

Andjelka S Ćelić, Edward T Petri, Jennifer Benbow, Michael E Hodsdon, Barbara E Ehrlich, Titus J Boggon

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Disrupting polycystin-2 EF hand CaJournal of cell science · 2020
    Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Global versus local mechanisms of temperature sensing in ion channels.Pflugers Archiv : European journal of physiology · 2018
    Review
  15. CaInternational journal of molecular sciences · 2018
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Andjelka S ĆelićDepartments of Pharmacology, Yale University School of Medicine, New Haven, Connecticut 06520; Departments of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut 06520.
Edward T PetriDepartments of Pharmacology, Yale University School of Medicine, New Haven, Connecticut 06520.
Jennifer BenbowDepartments of Pharmacology, Yale University School of Medicine, New Haven, Connecticut 06520; Departments of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut 06520.
Michael E HodsdonDepartments of Pharmacology, Yale University School of Medicine, New Haven, Connecticut 06520; Laboratory Medicine, Yale University School of Medicine, New Haven, Connecticut 06520.
Barbara E EhrlichDepartments of Pharmacology, Yale University School of Medicine, New Haven, Connecticut 06520; Departments of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut 06520.
Titus J BoggonDepartments of Pharmacology, Yale University School of Medicine, New Haven, Connecticut 06520. Electronic address: titus.boggon@yale.edu.
Yale University · US

Funding

YALE CENTER FOR THE STUDY OF POLYCYSTIC KIDNEY DISEASEP50DK057328 · NIDDK · YALE UNIVERSITY · PI SOMLO, STEFAN · 1999 to 2009
$11.1M
Training Program in Investigative HepatologyT32DK007356 · NIDDK · YALE UNIVERSITY · PI MICHAEL H NATHANSON · 1986 to 2026
$7.4M
Regulation of cholangiocytes by InsP3 receptor isoformsR01DK061747 · NIDDK · YALE UNIVERSITY · PI EHRLICH, BARBARA E., NATHANSON, MICHAEL H · 2003 to 2012
$3.4M
Regulation of polycystin-2 channel activityR01DK087844 · NIDDK · YALE UNIVERSITY · PI BOGGON, TITUS JONATHON, EHRLICH, BARBARA E. · 2010 to 2013
$1.6M
YALE BIOMEDICAL SUPERCOMPUTER: NEUROSCIENCES10RR019895 · NCRR · YALE UNIVERSITY · PI WILLIAMS, KENNETH ROBERT · 2004 to 2004
$1.6M
NCRR NIH HHS RR19895NCRR NIH HHS S10 RR019895NIDDK NIH HHS 5T32DK007356-32NIDDK NIH HHS P50 DK057328NIDDK NIH HHS P50DK057328NIDDK NIH HHS R01 DK061747NIDDK NIH HHS R01 DK087844NIDDK NIH HHS R01DK087844NIDDK NIH HHS R01DK61747NIDDK NIH HHS T32 DK007356
6 · The paper itself

Abstract

Polycystin-2 (PC2) is a Ca(2+)-permeable transient receptor potential channel activated and regulated by changes in cytoplasmic Ca(2+). PC2 mutations are responsible for ∼15% of autosomal dominant polycystic kidney disease. Although the C-terminal cytoplasmic tail of PC2 has been shown to contain a Ca(2+)-binding EF-hand domain, the molecular basis of PC2 channel gating by Ca(2+) remains unknown. We propose that the PC2 EF-hand is a Ca(2+) sensor required for channel gating. Consistent with this, Ca(2+) binding causes a dramatic decrease in the radius of gyration (R(g)) of the PC2 EF-hand by small angle x-ray scattering and significant conformational changes by NMR. Furthermore, increasing Ca(2+) concentrations cause the C-terminal cytoplasmic tail to transition from a mixture of extended oligomers to a single compact dimer by analytical ultracentrifugation, coupled with a >30 Å decrease in maximum interatomic distance (D(max)) by small angle x-ray scattering. Mutant PC2 channels unable to bind Ca(2+) via the EF-hand are inactive in single-channel planar lipid bilayers and inhibit Ca(2+) release from ER stores upon overexpression in cells, suggesting dominant negative properties. Our results support a model where PC2 channels are gated by discrete conformational changes in the C-terminal cytoplasmic tail in response to changes in cytoplasmic Ca(2+) levels. These properties of PC2 are lost in autosomal dominant polycystic kidney disease, emphasizing the importance of PC2 to kidney cell function. We speculate that PC2 and the Ca(2+)-dependent transient receptor potential channels in general are regulated by similar conformational changes in their cytoplasmic domains that are propagated to the channel pore.

Indexed as

Models, BiologicalModels, MolecularCalciumCell LineCrystallography, X-RayHumansIon Channel GatingProtein Structure, TertiaryTRPP Cation ChannelsCalciumTRPP Cation Channels

Identifiers

PMID22474326
PMCPMC3366810
OpenAlexW2028218115

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.