Evidence map›Paper›PMID 22474291›Full record

ArticleThe Journal of biological chemistry2012

Identification of the Bombyx red egg gene reveals involvement of a novel transporter family gene in late steps of the insect ommochrome biosynthesis pathway.

Mizuko Osanai-Futahashi, Ken-Ichiro Tatematsu, Kimiko Yamamoto, Junko Narukawa, Keiro Uchino, Takumi Kayukawa, Tetsuro Shinoda, Yutaka Banno, Toshiki Tamura, Hideki Sezutsu

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 80 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Mizuko Osanai-FutahashiTransgenic Silkworm Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8634, Japan. Electronic address: mfutahashi@nias.affrc.go.jp.
Ken-Ichiro TatematsuTransgenic Silkworm Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8634, Japan.
Kimiko YamamotoInsect Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8634, Japan.
Junko NarukawaInsect Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8634, Japan.
Keiro UchinoTransgenic Silkworm Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8634, Japan.
Takumi KayukawaInsect Growth Regulation Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8634, Japan.
Tetsuro ShinodaInsect Growth Regulation Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8634, Japan.
Yutaka BannoLaboratory of Insect Genetic Resources, Faculty of Agriculture, Kyushu University, Fukuoka 812-8581, Japan.
Toshiki TamuraTransgenic Silkworm Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8634, Japan.
Hideki SezutsuTransgenic Silkworm Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8634, Japan.
Institute of Agrobiological Sciences · JPKyushu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ommochromes are one of the major pigments involved in coloration of eggs, eyes, and body surface of insects. However, the molecular mechanisms of the final steps of ommochrome pigment synthesis have been largely unknown. The eggs of the silkworm Bombyx mori contain a mixture of ommochrome pigments, and exhibit a brownish lilac color. The recessive homozygous of egg and eye color mutant, red egg (re), whose eggs display a pale orange color instead of normal dark coloration, has been long suggested to have a defect in the biosynthesis of the final ommochrome pigments. Here, we identify the gene responsible for the re locus by positional cloning, mutant analysis, and RNAi experiments. In the re mutants, we found that a 541-bp transposable element is inserted into the ORF of BGIBMGA003497-1 (Bm-re) encoding a novel member of a major facilitator superfamily transporter, causing disruption of the splicing of exon 9, resulting in two aberrant transcripts with frameshifts yielding nonfunctional proteins lacking the C-terminal transmembrane domains. Bm-re function in pigmentation was confirmed by embryonic RNAi experiments. Homologs of the Bm-re gene were found in all insect genomes sequenced at present, except for 12 sequenced Drosophila genomes, which seemed to correlate with the previous studies that have demonstrated that eye ommochrome composition is different from other insects in several Dipterans. Knockdown of the Bm-re homolog by RNAi in the red flour beetle Tribolium castaneum caused adult compound eye coloration defects, indicating a conserved role in ommochrome pigment biosynthesis at least among holometabolous insects.

Indexed as

BombyxCarrier ProteinsInsect ProteinsTriboliumAnimalsBase SequenceDrosophila melanogasterGenes, InsectMolecular Sequence DataOpen Reading FramesPhenothiazinesCarrier ProteinsInsect ProteinsommochromePhenothiazines

Identifiers

PMID22474291
PMCPMC3366856
OpenAlexW2074458472

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.