Evidence map›Paper›PMID 22473856›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2012

ATP-binding cassette (ABC) transporter expression and localization in sea urchin development.

Lauren E Shipp, Amro Hamdoun

Abstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The roles of ABCB1/P-glycoprotein drug transporters in regulating gut microbes and inflammation: insights from animal models, old and new.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Functional diversification of sea urchin ABCC1 (MRP1) by alternative splicing.American journal of physiology. Cell physiology · 2016
    Article
  16. Article
  17. What do drug transporters really do?Nature reviews. Drug discovery · 2015
    Review
  18. Review
  19. The biology of the germ line in echinoderms.Molecular reproduction and development · 2014
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Lauren E ShippMarine Biology Research Division, Scripps Institution of Oceanography, University of California, San Diego, California 92093-0202, USA.
Amro Hamdoun
University of California, San Diego · US

Funding

Control of Multidrug Transport Activity in EmbryosR00HD058070 · NICHD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMDOUN, AMRO M · 2009 to 2011
$740k
Control of efflux transporter activity by cell surface reorganization in embryos.K99HD058070 · NICHD · STANFORD UNIVERSITY · PI HAMDOUN, AMRO M · 2008 to 2009
$180k
NICHD NIH HHS HD058070NICHD NIH HHS K99 HD058070NICHD NIH HHS R00 HD058070
6 · The paper itself

Abstract

backgroundATP-binding cassette (ABC) transporters are membrane proteins that regulate intracellular concentrations of myriad compounds and ions. There are >100 ABC transporter predictions in the Strongylocentrotus purpuratus genome, including 40 annotated ABCB, ABCC, and ABCG "multidrug efflux" transporters. Despite the importance of multidrug transporters for protection and signaling, their expression patterns have not been characterized in deuterostome embryos.

resultsSea urchin embryos expressed 20 ABCB, ABCC, and ABCG transporter genes in the first 58 hr of development, from unfertilized egg to early prism. We quantified transcripts of ABCB1a, ABCB4a, ABCC1, ABCC5a, ABCC9a, and ABCG2b, and found that ABCB1a mRNA was 10-100 times more abundant than other transporter mRNAs. In situ hybridization showed ABCB1a was expressed ubiquitously in embryos, while ABCC5a was restricted to secondary mesenchyme cells and their precursors. Fluorescent protein fusions showed localization of ABCB1a on apical cell surfaces, and ABCC5a on basolateral surfaces.

conclusionsEmbryos use many ABC transporters with predicted functions in cell signaling, lysosomal and mitochondrial homeostasis, potassium channel regulation, pigmentation, and xenobiotic efflux. Detailed characterization of ABCB1a and ABCC5a revealed that they have different temporal and spatial gene expression profiles and protein localization patterns that correlate to their predicted functions in protection and development, respectively.

Indexed as

Age FactorsAnimalsATP-Binding Cassette TransportersDNA, ComplementaryDNA PrimersGene Expression ProfilingGene Expression Regulation, DevelopmentalIn Situ HybridizationReal-Time Polymerase Chain ReactionSignal TransductionStrongylocentrotus purpuratusATP-Binding Cassette TransportersDNA, ComplementaryDNA Primers

Identifiers

PMID22473856
PMCPMC3354041
OpenAlexW2047376147

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.