Evidence map›Paper›PMID 22471618›Full record

ArticleBMC evolutionary biology2012

Different selective pressures lead to different genomic outcomes as newly-formed hybrid yeasts evolve.

Jeff S Piotrowski, Saisubramanian Nagarajan, Evgueny Kroll, Alison Stanbery, Kami E Chiotti, Arthur L Kruckeberg, Barbara Dunn, Gavin Sherlock, Frank Rosenzweig

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Loss of Heterozygosity and Its Importance in Evolution.Journal of molecular evolution · 2023
    Review
  5. Experimental evolution ofmicroPublication biology · 2023
    Article
  6. Lager Yeast Design Through Meiotic Segregation of aFrontiers in fungal biology · 2021
    Article
  7. Review
  8. Applications of Wild Isolates ofFrontiers in microbiology · 2020
    Review
  9. Review
  10. Differential Contribution of the Parental Genomes to aFrontiers in bioengineering and biotechnology · 2020
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Phenotype-Independent Isolation of InterspeciesFrontiers in microbiology · 2019
    Article
  17. Article
  18. Enhanced Wort Fermentation withApplied and environmental microbiology · 2018
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Jeff S PiotrowskiChemical Genomics Research Group, RIKEN Advance Science Institute, Wako, Wako, Japan.
Saisubramanian Nagarajan
Evgueny Kroll
Alison Stanbery
Kami E Chiotti
Arthur L Kruckeberg
Barbara Dunn
Gavin Sherlock
Frank Rosenzweig
University of Montana · USStanford University · USDuPont (United States) · USRIKEN · JPSASTRA University · IN

Funding

THE ROLE OF PULMONARY SUBPOPULATIONS AND TH2 IMMUNITY IN BALB/C SILICOSIS MODELP20RR017670 · NCRR · UNIVERSITY OF MONTANA · PI ROBERTS, KEVAN · 2002 to 2011
$22.0M
NCRR NIH HHS P20RR017670
6 · The paper itself

Abstract

backgroundInterspecific hybridization occurs in every eukaryotic kingdom. While hybrid progeny are frequently at a selective disadvantage, in some instances their increased genome size and complexity may result in greater stress resistance than their ancestors, which can be adaptively advantageous at the edges of their ancestors' ranges. While this phenomenon has been repeatedly documented in the field, the response of hybrid populations to long-term selection has not often been explored in the lab. To fill this knowledge gap we crossed the two most distantly related members of the Saccharomyces sensu stricto group, S. cerevisiae and S. uvarum, and established a mixed population of homoploid and aneuploid hybrids to study how different types of selection impact hybrid genome structure.

resultsAs temperature was raised incrementally from 31°C to 46.5°C over 500 generations of continuous culture, selection favored loss of the S. uvarum genome, although the kinetics of genome loss differed among independent replicates. Temperature-selected isolates exhibited greater inherent and induced thermal tolerance than parental species and founding hybrids, and also exhibited ethanol resistance. In contrast, as exogenous ethanol was increased from 0% to 14% over 500 generations of continuous culture, selection favored euploid S. cerevisiae x S. uvarum hybrids. Ethanol-selected isolates were more ethanol tolerant than S. uvarum and one of the founding hybrids, but did not exhibit resistance to temperature stress. Relative to parental and founding hybrids, temperature-selected strains showed heritable differences in cell wall structure in the forms of increased resistance to zymolyase digestion and Micafungin, which targets cell wall biosynthesis.

conclusionsThis is the first study to show experimentally that the genomic fate of newly-formed interspecific hybrids depends on the type of selection they encounter during the course of evolution, underscoring the importance of the ecological theatre in determining the outcome of the evolutionary play.

Indexed as

Adaptation, BiologicalComparative Genomic HybridizationEthanolGenome, FungalHybridization, GeneticKaryotypePopulation DensitySaccharomycesSelection, GeneticSpecies SpecificityTemperatureEthanol

Identifiers

PMID22471618
PMCPMC3372441
OpenAlexW2160246565

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.