Evidence map›Paper›PMID 2247076›Full record

ArticleMolecular and cellular biology1990

Two adjacent C/EBP-binding sequences that participate in the cell-specific expression of the mouse serum amyloid A3 gene.

X X Li, J H Huang, H Y Rienhoff, W S Liao

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1990. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 51 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

X X LiDepartment of Biochemistry and Molecular Biology, University of Texas M.D. Anderson Cancer Center, Houston 77030.
J H Huang
H Y Rienhoff
W S Liao
The University of Texas MD Anderson Cancer Center · US

Funding

MOLECULAR ASPECTS OF AMYLOIDOSISR01AR038858 · NIAMS · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI LIAO, WARREN S. · 1992 to 1999
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MOLECULAR ASPECTS OF AMYLOIDOSISR29AR038858 · NIAMS · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI LIAO, WARREN S. · 1987 to 1991
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NIAMS NIH HHS AR38858
6 · The paper itself

Abstract

Serum amyloid A (SAA) is a major acute-phase protein synthesized primarily in the liver. Its expression, very low in normal animals, is increased several hundredfold following acute inflammation. To examine DNA sequences involved in liver-specific expression, 5'-flanking regions of the mouse SAA3 gene were analyzed by transient transfection, band shift, and DNase I protection assays. We found that a 56-bp fragment immediately 5' to the TATA box spanning the region -93 to -38 relative to the transcription start site was sufficient to confer liver cell-specific transcriptional activation onto a heterologous promoter in a dose-dependent and orientation-independent manner. This DNA fragment could form DNA-protein complexes with heat-stable nuclear proteins, and the complexes formed could be specifically competed for by excess oligomers corresponding to the C/EBP- or DBP-binding sites but not by binding sites for three other liver-specific factors, HNF1, HNF3, and HNF4. Footprint analysis using Hep3B nuclear extracts revealed two adjacent footprint regions within this 56-bp fragment, the distal region having at least fivefold-greater affinity than the proximal region. Identical footprint patterns were observed when purified recombinant C/EBP protein was used. These results indicated that binding of C/EBP to this 56-bp fragment plays an important role in vivo in enhancing expression of the mouse SAA3 gene in hepatocytes.

Indexed as

Gene Expression RegulationPromoter Regions, GeneticAnimalsBase SequenceBinding SitesCCAAT-Enhancer-Binding ProteinsCell LineCell NucleusDeoxyribonuclease IDNADNA-Binding ProteinsLiverMiceMolecular Sequence DataNuclear ProteinsNucleotide MappingCCAAT-Enhancer-Binding ProteinsDeoxyribonuclease IDNADNA-Binding ProteinsNuclear ProteinsOligonucleotide ProbesSerum Amyloid A ProteinTranscription Factors

Identifiers

PMID2247076
PMCPMC362940
OpenAlexW2118477475

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.