Evidence map›Paper›PMID 22467852›Full record

ArticleJournal of cell science2012

The F-BAR domains from srGAP1, srGAP2 and srGAP3 regulate membrane deformation differently.

Jaeda Coutinho-Budd, Vladimir Ghukasyan, Mark J Zylka, Franck Polleux

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Zebrafish models of human-duplicatedbioRxiv : the preprint server for biology · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Revisiting I-BAR Proteins at Central Synapses.Frontiers in neural circuits · 2021
    Review
  9. Sculpting Dendritic Spines during Initiation and Maintenance of Neuropathic Pain.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Review
  10. Article
  11. Beyond Axon Guidance: Roles of Slit-Robo Signaling in Neocortical Formation.Frontiers in cell and developmental biology · 2020
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jaeda Coutinho-BuddNeurobiology Curriculum University of North Carolina, Chapel Hill, NC 27599-7250, USA.
Vladimir Ghukasyan
Mark J Zylka
Franck Polleux
University of North Carolina at Chapel Hill · USScripps Research Institute · US

Funding

UNC Neuroscience Center Research Cores: MicroscopyP30NS045892 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ZYLKA, MARK J. · 2003 to 2022
$11.5M
Functions of membrane deforming-proteins during neuronal developmentR01NS067557 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI POLLEUX, FRANCK · 2010 to 2020
$4.9M
analysis of srGAP2 in cortical development in vitro and in vivoF31NS068038 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI COUTINHO-BUDD, JAEDA · 2010 to 2012
$70k
NINDS NIH HHS 1F31NS068038NINDS NIH HHS 5P30NS045892NINDS NIH HHS 7R01NS067557NINDS NIH HHS F31 NS068038NINDS NIH HHS P30 NS045892NINDS NIH HHS R01 NS067557
6 · The paper itself

Abstract

Coordination of membrane deformation and cytoskeletal dynamics lies at the heart of many biological processes critical for cell polarity, motility and morphogenesis. We have recently shown that Slit-Robo GTPase-activating protein 2 (srGAP2) regulates neuronal morphogenesis through the ability of its F-BAR domain to regulate membrane deformation and induce filopodia formation. Here, we demonstrate that the F-BAR domains of two closely related family members, srGAP1 and srGAP3 [designated F-BAR(1) and F-BAR(3), respectively] display significantly different membrane deformation properties in non-neuronal COS7 cells and in cortical neurons. F-BAR(3) induces filopodia in both cell types, though less potently than F-BAR(2), whereas F-BAR(1) prevents filopodia formation in cortical neurons and reduces plasma membrane dynamics. These three F-BAR domains can heterodimerize, and they act synergistically towards filopodia induction in COS7 cells. As measured by fluorescence recovery after photobleaching, F-BAR(2) displays faster molecular dynamics than F-BAR(3) and F-BAR(1) at the plasma membrane, which correlates well with its increased potency to induce filopodia. We also show that the molecular dynamic properties of F-BAR(2) at the membrane are partially dependent on F-Actin. Interestingly, acute phosphatidylinositol 4,5-bisphosphate [PtdIns(4,5)P(2)] depletion in cells does not interfere with plasma membrane localization of F-BAR(2), which is compatible with our result showing that F-BAR(2) binds to a broad range of negatively-charged phospholipids present at the plasma membrane, including phosphatidylserine (PtdSer). Overall, our results provide novel insights into the functional diversity of the membrane deformation properties of this subclass of F-BAR-domains required for cell morphogenesis.

Indexed as

ActinsAnimalsCell MembraneCell MovementChlorocebus aethiopsCOS CellsCytoskeletonGTPase-Activating ProteinsHEK293 CellsHumansNeuronsProtein Structure, TertiaryPseudopodiaActinsGTPase-Activating Proteins

Identifiers

PMID22467852
PMCPMC3516379
OpenAlexW2046963712

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.